• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于线虫群体的化学感应偏好测定的自动化分析

Automated Analysis of a Nematode Population-based Chemosensory Preference Assay.

作者信息

Chai Cynthia M, Cronin Christopher J, Sternberg Paul W

机构信息

Division of Biology and Bioengineering, California Institute of Technology; Howard Hughes Medical Institute, California Institute of Technology;

Division of Biology and Bioengineering, California Institute of Technology; Howard Hughes Medical Institute, California Institute of Technology.

出版信息

J Vis Exp. 2017 Jul 13(125):55963. doi: 10.3791/55963.

DOI:10.3791/55963
PMID:28745641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5612354/
Abstract

The nematode, Caenorhabditis elegans' compact nervous system of only 302 neurons underlies a diverse repertoire of behaviors. To facilitate the dissection of the neural circuits underlying these behaviors, the development of robust and reproducible behavioral assays is necessary. Previous C. elegans behavioral studies have used variations of a "drop test", a "chemotaxis assay", and a "retention assay" to investigate the response of C. elegans to soluble compounds. The method described in this article seeks to combine the complementary strengths of the three aforementioned assays. Briefly, a small circle in the middle of each assay plate is divided into four quadrants with the control and experimental solutions alternately placed. After the addition of the worms, the assay plates are loaded into a behavior chamber where microscope cameras record the worms' encounters with the treated regions. Automated video analysis is then performed and a preference index (PI) value for each video is generated. The video acquisition and automated analysis features of this method minimizes the experimenter's involvement and any associated errors. Furthermore, minute amounts of the experimental compound are used per assay and the behavior chamber's multi-camera setup increases experimental throughput. This method is particularly useful for conducting behavioral screens of genetic mutants and novel chemical compounds. However, this method is not appropriate for studying stimulus gradient navigation due to the close proximity of the control and experimental solution regions. It should also not be used when only a small population of worms is available. While suitable for assaying responses only to soluble compounds in its current form, this method can be easily modified to accommodate multimodal sensory interaction and optogenetic studies. This method can also be adapted to assay the chemosensory responses of other nematode species.

摘要

线虫秀丽隐杆线虫仅由302个神经元组成的紧凑神经系统是其多样行为表现的基础。为了便于剖析这些行为背后的神经回路,开发强大且可重复的行为分析方法是必要的。以往秀丽隐杆线虫的行为研究使用了“滴落试验”“趋化性分析”和“记忆试验”的不同变体来研究秀丽隐杆线虫对可溶性化合物的反应。本文所述方法旨在结合上述三种分析方法的互补优势。简要来说,每个分析板中间的一个小圆圈被分成四个象限,对照溶液和实验溶液交替放置。加入线虫后,将分析板放入行为室,显微镜摄像头记录线虫与处理区域的接触情况。然后进行自动视频分析,并为每个视频生成一个偏好指数(PI)值。该方法的视频采集和自动分析功能最大限度地减少了实验者的参与及任何相关误差。此外,每次分析使用的实验化合物量极少,行为室的多摄像头设置提高了实验通量。该方法对于进行遗传突变体和新型化合物的行为筛选特别有用。然而,由于对照溶液区域和实验溶液区域靠得很近,该方法不适用于研究刺激梯度导航。当只有少量线虫可用时,也不应使用该方法。虽然目前这种形式仅适用于检测对可溶性化合物的反应,但该方法可以很容易地进行修改,以适应多模态感官相互作用和光遗传学研究。该方法也可适用于检测其他线虫物种的化学感应反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/051b3e28a644/jove-125-55963-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/51870f40d43d/jove-125-55963-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/b84f4dbc9d43/jove-125-55963-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/051b3e28a644/jove-125-55963-3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/51870f40d43d/jove-125-55963-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/b84f4dbc9d43/jove-125-55963-2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/15d3/5612354/051b3e28a644/jove-125-55963-3.jpg

相似文献

1
Automated Analysis of a Nematode Population-based Chemosensory Preference Assay.基于线虫群体的化学感应偏好测定的自动化分析
J Vis Exp. 2017 Jul 13(125):55963. doi: 10.3791/55963.
2
Modulation of Caenorhabditis elegans chemotaxis by cultivation and assay temperatures.培养温度和测定温度对秀丽隐杆线虫趋化性的调控
Neurosci Res. 2008 Mar;60(3):300-6. doi: 10.1016/j.neures.2007.11.010. Epub 2007 Dec 8.
3
Tracking movement behavior of multiple worms on food.追踪多条线虫在食物上的运动行为。
Cold Spring Harb Protoc. 2011 Dec 1;2011(12):1483-7. doi: 10.1101/pdb.prot067025.
4
Phase-dependent preference of thermosensation and chemosensation during simultaneous presentation assay in Caenorhabditis elegans.秀丽隐杆线虫同时呈现试验中热感觉和化学感觉的相位依赖性偏好
BMC Neurosci. 2008 Nov 1;9:106. doi: 10.1186/1471-2202-9-106.
5
A multi-animal tracker for studying complex behaviors.一种用于研究复杂行为的多动物追踪器。
BMC Biol. 2017 Apr 6;15(1):29. doi: 10.1186/s12915-017-0363-9.
6
Quantitative analysis of Caenorhabditis elegans chemotaxis using a microfluidic device.使用微流控装置对秀丽隐杆线虫趋化性进行定量分析。
Anal Chim Acta. 2015 Aug 5;887:155-162. doi: 10.1016/j.aca.2015.07.036. Epub 2015 Aug 10.
7
Acute behavioral responses to pheromones in C. elegans (adult behaviors: attraction, repulsion).秀丽隐杆线虫对信息素的急性行为反应(成虫行为:吸引、排斥)。
Methods Mol Biol. 2013;1068:285-92. doi: 10.1007/978-1-62703-619-1_21.
8
A Caenorhabditis elegans Nutritional-status Based Copper Aversion Assay.一种基于秀丽隐杆线虫营养状态的铜厌恶测定法。
J Vis Exp. 2017 Jul 26(125):55939. doi: 10.3791/55939.
9
Chemosensory behavior of semi-restrained Caenorhabditis elegans.半束缚秀丽隐杆线虫的化学感应行为
J Neurobiol. 2005 Nov;65(2):171-8. doi: 10.1002/neu.20196.
10
Irrational behavior in C. elegans arises from asymmetric modulatory effects within single sensory neurons.线虫中的非理性行为源于单个感觉神经元内的不对称调节效应。
Nat Commun. 2019 Jul 19;10(1):3202. doi: 10.1038/s41467-019-11163-3.

引用本文的文献

1
Measurement of the Effects of Metals on Taxis-to-Food Behavior in Caenorhabditis elegans.测量金属对秀丽隐杆线虫向食行为的影响。
Curr Protoc. 2021 May;1(5):e131. doi: 10.1002/cpz1.131.
2
Overview of Chemotaxis Behavior Assays in Caenorhabditis elegans.秀丽隐杆线虫趋化行为检测概述。
Curr Protoc. 2021 May;1(5):e120. doi: 10.1002/cpz1.120.
3
Biology and genome of a newly discovered sibling species of Caenorhabditis elegans.一种新发现的秀丽隐杆线虫姐妹种的生物学和基因组。

本文引用的文献

1
Concentration memory-dependent synaptic plasticity of a taste circuit regulates salt concentration chemotaxis in Caenorhabditis elegans.味觉回路的浓度记忆依赖性突触可塑性调节秀丽隐杆线虫对盐浓度的趋化性。
Nat Commun. 2013;4:2210. doi: 10.1038/ncomms3210.
2
Ascaroside signaling is widely conserved among nematodes.类蛔虫素信号在线虫中广泛保守。
Curr Biol. 2012 May 8;22(9):772-80. doi: 10.1016/j.cub.2012.03.024. Epub 2012 Apr 12.
3
The structure of the nervous system of the nematode Caenorhabditis elegans.秀丽隐杆线虫的神经系统结构。
Nat Commun. 2018 Aug 10;9(1):3216. doi: 10.1038/s41467-018-05712-5.
Philos Trans R Soc Lond B Biol Sci. 1986 Nov 12;314(1165):1-340. doi: 10.1098/rstb.1986.0056.
4
High-throughput behavioral analysis in C. elegans.秀丽隐杆线虫的高通量行为分析。
Nat Methods. 2011 Jun 5;8(7):592-8. doi: 10.1038/nmeth.1625.
5
Food sensitizes C. elegans avoidance behaviours through acute dopamine signalling.食物通过急性多巴胺信号来敏化秀丽隐杆线虫的回避行为。
EMBO J. 2011 Mar 16;30(6):1110-22. doi: 10.1038/emboj.2011.22. Epub 2011 Feb 8.
6
A blend of small molecules regulates both mating and development in Caenorhabditis elegans.小分子混合物调控秀丽隐杆线虫的交配和发育。
Nature. 2008 Aug 28;454(7208):1115-8. doi: 10.1038/nature07168. Epub 2008 Jul 23.
7
Light-sensitive neurons and channels mediate phototaxis in C. elegans.光敏感神经元和通道介导秀丽隐杆线虫的趋光性。
Nat Neurosci. 2008 Aug;11(8):916-22. doi: 10.1038/nn.2155. Epub 2008 Jul 6.
8
The Parallel Worm Tracker: a platform for measuring average speed and drug-induced paralysis in nematodes.平行线虫追踪器:一种用于测量线虫平均速度和药物诱导麻痹的平台。
PLoS One. 2008 May 21;3(5):e2208. doi: 10.1371/journal.pone.0002208.
9
Two anterograde intraflagellar transport motors cooperate to build sensory cilia on C. elegans neurons.两个正向鞭毛内运输马达协同作用,在秀丽隐杆线虫神经元上构建感觉纤毛。
Nat Cell Biol. 2004 Nov;6(11):1109-13. doi: 10.1038/ncb1186. Epub 2004 Oct 17.
10
Worms taste bitter: ASH neurons, QUI-1, GPA-3 and ODR-3 mediate quinine avoidance in Caenorhabditis elegans.线虫厌恶性味觉的神经机制:ASH神经元、QUI-1、GPA-3和ODR-3介导秀丽隐杆线虫对奎宁的回避反应
EMBO J. 2004 Mar 10;23(5):1101-11. doi: 10.1038/sj.emboj.7600107. Epub 2004 Feb 26.