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毛竹 WRKY 基因家族的鉴定与表达分析。

Characterization and expression analysis of the WRKY gene family in moso bamboo.

机构信息

International Center for Bamboo and Rattan, Key Laboratory of Bamboo and Rattan Science and Technology, State Forestry Administration, Beijing, 100102, People's Republic of China.

College of Forestry, Northwest Agriculture & Forestry University, Yangling, Shaanxi, 712100, People's Republic of China.

出版信息

Sci Rep. 2017 Jul 27;7(1):6675. doi: 10.1038/s41598-017-06701-2.

Abstract

The WRKY family of transcription factors (TFs) is one of the ten largest families of TFs in higher plants and has been implicated in multiple biological processes. Here, we identified 121 WRKY TFs in moso bamboo, including five novel members that were not annotated in the Phyllostachys edulis genomic database. Estimation of the divergence time of paralogous gene pairs revealed an important role of the recent whole-genome duplication in the expansion of the WRKY family. Expression analysis based on quantitative reverse-transcription polymerase chain reaction (qRT-PCR) data revealed that a large number of PheWRKY genes varied significantly under cold or drought stress treatments, which could be defined as abiotic stress-responsive genes. The overexpression of PheWRKY72-2 in Arabidopsis resulted in a decreased sensitivity to drought stress during early seedling growth. PheWRKY72-2 may enhance plant tolerance to stress by functioning as a positive regulator of stoma closure. Our study provides a theoretical foundation and some experimental evidence for further functional verification of the PheWRKY family of TFs.

摘要

WRKY 转录因子(TFs)家族是高等植物中最大的 TF 家族之一,涉及多种生物学过程。在这里,我们在毛竹中鉴定了 121 个 WRKY TFs,其中包括 5 个在 Phyllostachys edulis 基因组数据库中未注释的新成员。对旁系同源基因对的分歧时间的估计表明,最近的全基因组复制在 WRKY 家族的扩张中发挥了重要作用。基于定量逆转录聚合酶链反应(qRT-PCR)数据的表达分析表明,大量 PheWRKY 基因在冷或干旱胁迫处理下差异显著,可定义为非生物胁迫响应基因。在拟南芥中过表达 PheWRKY72-2 导致幼苗生长早期对干旱胁迫的敏感性降低。PheWRKY72-2 可能通过作为气孔关闭的正调节剂增强植物对胁迫的耐受性。我们的研究为进一步验证 PheWRKY 家族 TFs 的功能提供了理论基础和一些实验证据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b97a/5532226/ca94125bb7fe/41598_2017_6701_Fig1_HTML.jpg

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