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实验电荷密度研究:数据精简与模型质量:越多越好?

Experimental charge-density studies: data reduction and model quality: the more the better?

作者信息

Herbst-Irmer Regine, Stalke Dietmar

机构信息

Institut für Anorganische Chemie, Georg-August Universität, Tammannstr. 4, 37077 Göttingen, Germany.

出版信息

Acta Crystallogr B Struct Sci Cryst Eng Mater. 2017 Aug 1;73(Pt 4):531-543. doi: 10.1107/S2052520617007016. Epub 2017 Jul 25.

DOI:10.1107/S2052520617007016
PMID:28762965
Abstract

In this review, recent developments concerning data and model quality in experimental charge-density investigations from a personal view-point are described. Data quality is not only achieved by the high resolution, high I/σ(I) values, low merging R values and high multiplicity. The quality of the innermost reflections especially is crucial for mapping the density distribution of the outermost valence electrons and can be monitored by (I/σ). New detector technologies seem to be promising improvements. Empirical corrections to correct for low-energy contamination of mirror-focused X-ray data and for resolution- and temperature-dependent errors caused by factors such as thermal diffuse scattering are described. Shashlik-like residual density patterns can indicate the need for an anharmonic description of the thermal motion of individual atoms. The physical reliability of the derived model must be thoroughly analysed. The derived probability density functions for the mean-squared atomic vibrational displacements especially should have only small negative values. The treatment of H atoms has been improved by methods to estimate anisotropic thermal motion. For very high resolution data, the polarization of the core density cannot be neglected. Several tools to detect systematic errors are described. A validation tool is presented that easily detects when the refinement of additional parameters yields a real improvement in the model or simply overfits the given data. In all investigated structures, it is proved that the multipole parameters of atoms with a comparable chemical environment should be constrained to be identical. The use of restraints could be a promising alternative.

摘要

在本综述中,从个人观点出发描述了实验电荷密度研究中有关数据和模型质量的最新进展。数据质量不仅通过高分辨率、高I/σ(I)值、低合并R值和高多重性来实现。最内层反射的质量对于绘制最外层价电子的密度分布尤为关键,并且可以通过(I/σ)进行监测。新的探测器技术似乎是很有前景的改进方向。描述了用于校正镜面聚焦X射线数据的低能污染以及由热漫散射等因素引起的分辨率和温度依赖性误差的经验校正方法。类似沙什利克的残余密度模式可以表明需要对单个原子的热运动进行非谐描述。必须对导出模型的物理可靠性进行全面分析。特别是导出的平均平方原子振动位移的概率密度函数应该只有很小的负值。通过估计各向异性热运动的方法改进了对H原子的处理。对于非常高分辨率的数据,核心密度的极化不能被忽略。描述了几种检测系统误差的工具。提出了一种验证工具,它可以很容易地检测出额外参数的精修何时能真正改进模型,或者只是对给定数据过度拟合。在所有研究的结构中,证明了具有可比化学环境的原子的多极参数应被约束为相同。使用约束可能是一种很有前景的替代方法。

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