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皮氏魮脂鲤属(脂鲤目,魮脂鲤科)的进化关系及细胞分类学考量

Evolutionary Relationships and Cytotaxonomy Considerations in the Genus Pyrrhulina (Characiformes, Lebiasinidae).

作者信息

de Moraes Renata Luiza Rosa, Bertollo Luiz Antonio Carlos, Marinho Manoela Maria Ferreira, Yano Cassia Fernanda, Hatanaka Terumi, Barby Felipe Faix, Troy Waldo Pinheiro, Cioffi Marcelo de Bello

机构信息

1 Departamento de Genética e Evolução, Universidade Federal de São Carlos (UFSCar) , São Carlos, Brazil .

2 Museu de Zoologia da Universidade de São Paulo (MZUSP) , São Paulo, Brazil .

出版信息

Zebrafish. 2017 Dec;14(6):536-546. doi: 10.1089/zeb.2017.1465. Epub 2017 Aug 2.

Abstract

Although fishes exhibit the greatest biodiversity among the vertebrates, a large percentage of this fauna is still underexplored on evolutionary cytogenetic questions, particularly the miniature species. The Lebiasinidae family is a particular example for such case. This study is the first one presenting differential cytogenetic methods, such as C-banding, repetitive DNAs mapping, comparative genomic hybridization (CGH), and whole chromosome painting in lebiasinid species. Pyrrhulina australis and Pyrrhulina aff. australis were deeply investigated concerning their chromosomal patterns and evolutionary relationships. These species have a very similar morphology, but they can be distinguished by a longitudinal midlateral faintly dark stripe exclusive for Pyrrhulina aff. australis. Both species presented 2n = 40 chromosomes (4st +36a), without heteromorphic sex chromosomes. However, despite their morphological and karyotype resemblance, it was evidenced that both species have already gone through a significant genomic divergence, thus corresponding to distinct evolutionary units. Furthermore, to give additional support to some proposals on evolutionary relationship among Lebiasinidae with other fish families, a chromosomal comparative approach with Erythrinus erythrinus, a representative species of the Erythrinidae family, was also performed. In addition to have similar karyotype structure, mainly composed by acrocentric chromosomes, both species share uncommon genomic similarities, such as (i) syntenic location of 5S and 18S rDNA sequences; (ii) huge dispersion of multiple 5S rDNA sites in the karyotypes; and (iii) complex association between 5S rDNA and Rex3 elements. CGH experiments, despite reinforcing some shared genomic homologies, also highlighted that both Pyrrhulina and Erythrinus have a range of nonoverlapping species-specific signals. The overall chromosomal data proved to be effective markers for the cytotaxonomy and evolutionary process among Lebiasinidae fishes.

摘要

尽管鱼类在脊椎动物中展现出了最为丰富的生物多样性,但该动物群中很大一部分在进化细胞遗传学问题上仍未得到充分探索,尤其是微型物种。脂鲤科就是这样一个典型例子。本研究首次在脂鲤科物种中展示了多种差异细胞遗传学方法,如C带、重复DNA图谱分析、比较基因组杂交(CGH)以及全染色体涂染。对南方细脂鲤和似南方细脂鲤的染色体模式及进化关系进行了深入研究。这两个物种形态非常相似,但似南方细脂鲤具有一条仅其独有的沿体侧纵向的浅黑色条纹,可据此将二者区分开来。两个物种均有2n = 40条染色体(4条中着丝粒染色体 + 36条端着丝粒染色体),且无异形性染色体。然而,尽管它们在形态和核型上相似,但已证明这两个物种经历了显著的基因组分化,因此属于不同的进化单元。此外,为了进一步支持关于脂鲤科与其他鱼类家族进化关系的一些提议,还采用了与脂鲤科代表性物种红腹锯鲑脂鲤进行染色体比较的方法。除了具有相似的核型结构(主要由近端着丝粒染色体组成)外,这两个物种还具有一些罕见的基因组相似性,例如:(i)5S和18S rDNA序列的同线性定位;(ii)核型中多个5S rDNA位点的大量分散;以及(iii)5S rDNA与Rex3元件之间的复杂关联。CGH实验尽管强化了一些共享的基因组同源性,但也突出表明细脂鲤属和锯鲑脂鲤属都有一系列不重叠的物种特异性信号。总体染色体数据被证明是脂鲤科鱼类细胞分类学和进化过程的有效标记。

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