Tian Huaiyu, Sun Zhe, Faria Nuno Rodrigues, Yang Jing, Cazelles Bernard, Huang Shanqian, Xu Bo, Yang Qiqi, Pybus Oliver G, Xu Bing
State Key Laboratory of Remote Sensing Science, College of Global Change and Earth System Science, Beijing Normal University, Beijing, China.
Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System Science, School of Environment, Tsinghua University, Beijing, China.
PLoS Negl Trop Dis. 2017 Aug 3;11(8):e0005694. doi: 10.1371/journal.pntd.0005694. eCollection 2017 Aug.
The incidence of dengue has grown dramatically in recent decades worldwide, especially in Southeast Asia and the Americas with substantial transmission in 2014-2015. Yet the mechanisms underlying the spatio-temporal circulation of dengue virus (DENV) serotypes at large geographical scales remain elusive. Here we investigate the co-circulation in Asia of DENV serotypes 1-3 from 1956 to 2015, using a statistical framework that jointly estimates migration history and quantifies potential predictors of viral spatial diffusion, including socio-economic, air transportation and maritime mobility data. We find that the spread of DENV-1, -2 and -3 lineages in Asia is significantly associated with air traffic. Our analyses suggest the network centrality of air traffic hubs such as Thailand and India contribute to seeding dengue epidemics, whilst China, Cambodia, Indonesia, and Singapore may establish viral diffusion links with multiple countries in Asia. Phylogeographic reconstructions help to explain how growing air transportation networks could influence the dynamics of DENV circulation.
近几十年来,登革热的发病率在全球范围内急剧上升,尤其是在东南亚和美洲地区,2014 - 2015年出现了大规模传播。然而,在大地理尺度上,登革热病毒(DENV)血清型的时空传播机制仍然难以捉摸。在此,我们利用一个统计框架,对1956年至2015年亚洲地区DENV 1 - 3血清型的共同传播情况进行了调查,该框架联合估计了传播历史,并量化了病毒空间扩散的潜在预测因素,包括社会经济、航空运输和海上流动数据。我们发现,DENV - 1、- 2和- 3谱系在亚洲的传播与空中交通显著相关。我们的分析表明,泰国和印度等航空枢纽的网络中心性有助于登革热疫情的传播,而中国、柬埔寨、印度尼西亚和新加坡可能与亚洲多个国家建立病毒扩散联系。系统发育地理学重建有助于解释不断发展的航空运输网络如何影响DENV传播动态。