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2
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes.植物体内的隐秘世界:定义微生物内生菌功能的生态与进化考量
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Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
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fPoxDB: fungal peroxidase database for comparative genomics.fPoxDB:用于比较基因组学的真菌过氧化物酶数据库。
BMC Microbiol. 2014 May 8;14:117. doi: 10.1186/1471-2180-14-117.
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Fungal plant cell wall-degrading enzyme database: a platform for comparative and evolutionary genomics in fungi and Oomycetes.真菌植物细胞壁降解酶数据库:真菌和卵菌比较与进化基因组学的平台。
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SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.SOAPdenovo2:一种经验丰富的、内存效率高的短读长从头组装器。
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Fungal secretome database: integrated platform for annotation of fungal secretomes.真菌分泌组数据库:真菌分泌组注释的集成平台。
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从芦苇植物(Phragmites australis)中分离得到的内生真菌Neofusicoccum sp.菌株JS-464的基因组序列草图

Draft Genome Sequence of an Endophytic Fungus, sp. Strain JS-464, Isolated from a Reed Plant, .

作者信息

Kim Jung A, Jeon Jongbum, Kim Ki-Tae, Choi Gobong, Park Sook-Young, Lee Hyun-Jung, Shim Sang-Hee, Lee Yong-Hwan, Kim Soonok

机构信息

Genetic Resources Assessment Division, National Institute of Biological Resources, Incheon, South Korea.

Department of Agricultural Biotechnology, Interdisciplinary Program in Agricultural Genomics, Center for Fungal Genetic Resources, and Center for Fungal Pathogenesis, Seoul National University, Seoul, South Korea.

出版信息

Genome Announc. 2017 Aug 3;5(31):e00734-17. doi: 10.1128/genomeA.00734-17.

DOI:10.1128/genomeA.00734-17
PMID:28774982
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5543644/
Abstract

An endophytic fungus, sp. strain JS-464, is capable of producing a number of secondary metabolites which showed significant nitric oxide reduction activity. The draft genome assembly has a size of 53,151,282 bp, with a G+C content of 53.11% consisting of 80 scaffolds with an of 7.46 Mbp.

摘要

一种内生真菌,sp. 菌株JS-464,能够产生多种具有显著一氧化氮还原活性的次生代谢产物。基因组草图组装大小为53,151,282 bp,G+C含量为53.11%,由80个支架组成,平均长度为7.46 Mbp。