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J Appl Microbiol. 2019 Mar;126(3):894-904. doi: 10.1111/jam.14138. Epub 2019 Jan 15.
2
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Bioinformatics. 2018 Jun 15;34(12):2019-2028. doi: 10.1093/bioinformatics/bty020.
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BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics.BUSCO的应用:从质量评估到基因预测和系统发育基因组学
Mol Biol Evol. 2018 Mar 1;35(3):543-548. doi: 10.1093/molbev/msx319.
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Nucleic Acids Res. 2015 Jul 1;43(W1):W237-43. doi: 10.1093/nar/gkv437. Epub 2015 May 6.
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SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.SSPACE-LongRead:利用长读段序列信息搭建细菌草图基因组支架
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fPoxDB: fungal peroxidase database for comparative genomics.fPoxDB:用于比较基因组学的真菌过氧化物酶数据库。
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来自[具体来源未提及]的内生真菌JS-1675的基因组序列草图

Draft Genome Sequence of JS-1675, an Endophytic Fungus from .

作者信息

Jeon Jongbum, Park Sook-Young, Kim Jung A, Yu Nan Hee, Park Ae Ran, Kim Jin-Cheol, Lee Yong-Hwan, Kim Soonok

机构信息

Department of Agricultural Biotechnology, Interdisciplinary Program in Agricultural Genomics, Center for Fungal Genetic Resources, Seoul National University, Seoul, South Korea.

Department of Plant Medicine, Sunchon National University, Suncheon, South Korea.

出版信息

Microbiol Resour Announc. 2019 May 16;8(20):e00069-19. doi: 10.1128/MRA.00069-19.

DOI:10.1128/MRA.00069-19
PMID:31097494
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6522779/
Abstract

The fungus strain JS-1675 has been reported to exert antimicrobial effects against various plant-pathogenic bacteria and fungi. Here, we report the draft genome sequence of for the first time. The assembly comprises 48,177,783 bp with 18 scaffolds.

摘要

据报道,真菌菌株JS-1675对多种植物病原菌和真菌具有抗菌作用。在此,我们首次报道其基因组草图序列。该组装序列包含48,177,783 bp,有18个支架。