Lee Dong Wan, Lee Aslan Hwanhwi, Lee Hanbyul, Kim Jae-Jin, Khim Jong Seong, Yim Un Hyuk, Kim Beom Seok
BK21 Plus Eco-Leader Education Center, Korea University, Seoul 02841, Republic of Korea.
Division of Environmental Science and Ecological Engineering, College of Life Science and Biotechnology, Korea University, Seoul 02841, Republic of Korea.
Int J Syst Evol Microbiol. 2017 Jul;67(7):2332-2336. doi: 10.1099/ijsem.0.001954.
A novel Gram-stain-positive, irregularly rod-shaped actinomycete, designated strain 002-2T, was isolated from sand beach sediment collected from the Taean seashore, Republic of Korea. Cells were aerobic, oxidase-negative and catalase-positive. Colonies of cells were bright yellow, circular, smooth and convex. The diagnostic diamino acid in the cell wall was ll-diaminopimelic acid. The predominant menaquinone was MK-8(H4). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, an unknown phospholipid and two unknown amino phospholipids. The major fatty acids were iso-C16 : 0 and C17 : 1ω8c. The DNA G+C content was 68.8 mol%. 16S rRNA gene sequence analysis revealed that strain 002-2T belongs to the family Nocardioidaceae and formed a cluster with Nocardioides rubroscoriae Sco-A25T (98.1 % sequence similarity) and Nocardioides plantarum NCIMB 12834T (97.6 %). On the basis of the phenotypic and phylogenetic data, strain 002-2T (=KCTC 39838T=DSM 103718T) is considered to represent a novel species of the genus Nocardioides, for which the name Nocardioides litoris sp. nov. is proposed.
从韩国泰安海岸采集的沙滩沉积物中分离出一株新型革兰氏阳性、不规则杆状放线菌,命名为菌株002-2T。细胞为需氧型,氧化酶阴性,过氧化氢酶阳性。细胞菌落呈亮黄色、圆形、光滑且凸起。细胞壁中的诊断性二氨基氨基酸为L-二氨基庚二酸。主要的甲基萘醌是MK-8(H4)。极性脂类为双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、一种未知的磷脂和两种未知的氨基磷脂。主要脂肪酸为异-C16 : 0和C17 : 1ω8c。DNA G+C含量为68.8 mol%。16S rRNA基因序列分析表明,菌株002-2T属于诺卡氏菌科,与红皮诺卡氏菌Sco-A25T(序列相似性为98.1 %)和植物诺卡氏菌NCIMB 12834T(序列相似性为97.6 %)形成一个簇。基于表型和系统发育数据,菌株002-2T(=KCTC 39838T=DSM 103718T)被认为代表诺卡氏菌属的一个新物种,为此提出新名称滨海诺卡氏菌(Nocardioides litoris sp. nov.)。