Suppr超能文献

天然细菌成因氧化铁中亚微米尺度下微生物周围铁物种的空间分辨分布

Spatially Resolved Distribution of Fe Species around Microbes at the Submicron Scale in Natural Bacteriogenic Iron Oxides.

作者信息

Suga Hiroki, Kikuchi Sakiko, Takeichi Yasuo, Miyamoto Chihiro, Miyahara Masaaki, Mitsunobu Satoshi, Ohigashi Takuji, Mase Kazuhiko, Ono Kanta, Takahashi Yoshio

机构信息

Department of Earth and Planetary Systems Science, Graduate School of Science (DEPSS), Hiroshima University.

Project Team for Development of New-Generation Research Protocol for Submarine Resources, Japan Agency for Marine-Earth Science and Technology (JAMSTEC).

出版信息

Microbes Environ. 2017 Sep 27;32(3):283-287. doi: 10.1264/jsme2.ME17009. Epub 2017 Aug 5.

Abstract

Natural bacteriogenic iron oxides (BIOS) were investigated using local-analyzable synchrotron-based scanning transmission X-ray microscopy (STXM) with a submicron-scale resolution. Cell, cell sheath interface (EPS), and sheath in the BIOS were clearly depicted using C-, N-, and O- near edge X-ray absorption fine structure (NEXAFS) obtained through STXM measurements. Fe-NEXAFS obtained from different regions of BIOS indicated that the most dominant iron mineral species was ferrihydrite. Fe(II)- and/or Fe(III)-acidic polysaccharides accompanied ferrihydrite near the cell and EPS regions. Our STXM/NEXAFS analysis showed that Fe species change continuously between the cell, EPS, and sheath under several 10-nm scales.

摘要

利用具有亚微米级分辨率的基于同步加速器的局部可分析扫描透射X射线显微镜(STXM)对天然细菌生成的铁氧化物(BIOS)进行了研究。通过STXM测量获得的C、N和O近边X射线吸收精细结构(NEXAFS)清晰地描绘了BIOS中的细胞、细胞鞘界面(EPS)和鞘。从BIOS不同区域获得的Fe-NEXAFS表明,最主要的铁矿物种类是水铁矿。在细胞和EPS区域附近,Fe(II)和/或Fe(III)酸性多糖与水铁矿相伴。我们的STXM/NEXAFS分析表明,在几十纳米的尺度下,细胞、EPS和鞘之间的Fe物种会持续变化。

相似文献

1
Spatially Resolved Distribution of Fe Species around Microbes at the Submicron Scale in Natural Bacteriogenic Iron Oxides.
Microbes Environ. 2017 Sep 27;32(3):283-287. doi: 10.1264/jsme2.ME17009. Epub 2017 Aug 5.
3
Bacteriogenic Fe(III) (oxyhydr)oxides characterized by synchrotron microprobe coupled with spatially resolved phylogenetic analysis.
Environ Sci Technol. 2012 Mar 20;46(6):3304-11. doi: 10.1021/es203860m. Epub 2012 Mar 8.
5
Speciation and distribution of copper in a mining soil using multiple synchrotron-based bulk and microscopic techniques.
Environ Sci Pollut Res Int. 2014 Feb;21(4):2943-54. doi: 10.1007/s11356-013-2214-8. Epub 2013 Oct 30.
6
XAS analysis of iron and palladium bonded to a polysaccharide produced anaerobically by a strain of Klebsiella oxytoca.
J Synchrotron Radiat. 2015 Sep;22(5):1215-26. doi: 10.1107/S1600577515010371. Epub 2015 Jul 16.
7
Iron (Fe) speciation in xylem sap by XANES at a high brilliant synchrotron X-ray source: opportunities and limitations.
Anal Bioanal Chem. 2013 Jun;405(16):5411-9. doi: 10.1007/s00216-013-6959-1. Epub 2013 Apr 24.
9
Distribution and Speciation of Cu in the Root Border Cells of Rice by STXM Combined with NEXAFS.
Bull Environ Contam Toxicol. 2016 Mar;96(3):408-14. doi: 10.1007/s00128-015-1716-0. Epub 2015 Dec 17.

引用本文的文献

1
The Structure of Natural Biogenic Iron (Oxyhydr)oxides Formed in Circumneutral pH Environments.
Geochim Cosmochim Acta. 2021 Sep 1;308:237-255. doi: 10.1016/j.gca.2021.05.059. Epub 2021 Jun 8.

本文引用的文献

1
Limited reduction of ferrihydrite encrusted by goethite in freshwater sediment.
Geobiology. 2016 Jul;14(4):374-89. doi: 10.1111/gbi.12181. Epub 2016 Mar 30.
5
Micro- and nano-environments of C sequestration in soil: a multi-elemental STXM-NEXAFS assessment of black C and organomineral associations.
Sci Total Environ. 2012 Nov 1;438:372-88. doi: 10.1016/j.scitotenv.2012.08.071. Epub 2012 Sep 28.
6
Bacteriogenic Fe(III) (oxyhydr)oxides characterized by synchrotron microprobe coupled with spatially resolved phylogenetic analysis.
Environ Sci Technol. 2012 Mar 20;46(6):3304-11. doi: 10.1021/es203860m. Epub 2012 Mar 8.
7
Structural and spatial associations between Fe, O, and C in the network structure of the Leptothrix ochracea sheath surface.
Appl Environ Microbiol. 2011 Nov;77(21):7873-5. doi: 10.1128/AEM.06003-11. Epub 2011 Sep 16.
9
Chemical modification of biogenous iron oxide to create an excellent enzyme scaffold.
Org Biomol Chem. 2010 Jan 21;8(2):336-8. doi: 10.1039/b919497e. Epub 2009 Oct 19.
10
Comparison of NEXAFS microscopy and TEM-EELS for studies of soft matter.
Micron. 2008;39(3):311-9. doi: 10.1016/j.micron.2007.09.008. Epub 2007 Oct 2.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验