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基于结构的选择性共价丙肝病毒NS3/4A蛋白酶抑制剂设计路线图

Road Map for the Structure-Based Design of Selective Covalent HCV NS3/4A Protease Inhibitors.

作者信息

Shunmugam Letitia, Ramharack Pritika, Soliman Mahmoud E S

机构信息

Molecular Modeling and Drug Design Research Group, School of Health Sciences, University of KwaZulu-Natal, Westville Campus, Durban, 4001, South Africa.

College of Pharmacy and Pharmaceutical Sciences, Florida Agricultural and Mechanical University, FAMU, Tallahassee, FL, 32307, USA.

出版信息

Protein J. 2017 Oct;36(5):397-406. doi: 10.1007/s10930-017-9736-8.

DOI:10.1007/s10930-017-9736-8
PMID:28815420
Abstract

Over the last 2 decades, covalent inhibitors have gained much popularity and is living up to its reputation as a powerful tool in drug discovery. Covalent inhibitors possess many significant advantages including increased biochemical efficiency, prolonged duration and the ability to target shallow, solvent exposed substrate-binding domains. However, rapidly mounting concerns over the potential toxicity, highly reactive nature and general lack of selectivity have negatively impacted covalent inhibitor development. Recently, a great deal of emphasis by the pharmaceutical industry has been placed toward the development of novel approaches to alleviate the major challenges experienced through covalent inhibition. This has unexpectedly led to the emergence of "selective" covalent inhibitors. The purpose of this review is not only to provide an overview from literature but to introduce a technical guidance as to how to initiate a systematic "road map" for the design of selective covalent inhibitors which we believe may assist in the design and development of optimized potential selective covalent HCV NS3/4A viral protease inhibitors.

摘要

在过去的20年里,共价抑制剂越来越受欢迎,并且不负其作为药物发现中强大工具的声誉。共价抑制剂具有许多显著优势,包括提高生化效率、延长作用时间以及能够靶向暴露于溶剂中的浅底物结合结构域。然而,对潜在毒性、高反应活性以及普遍缺乏选择性的担忧迅速增加,对共价抑制剂的开发产生了负面影响。最近,制药行业高度重视开发新方法,以缓解共价抑制所面临的主要挑战。这意外地导致了“选择性”共价抑制剂的出现。本综述的目的不仅是对文献进行概述,还将介绍一份技术指南,说明如何启动一个系统的“路线图”来设计选择性共价抑制剂,我们相信这可能有助于设计和开发优化的潜在选择性共价丙肝病毒NS3/4A病毒蛋白酶抑制剂。

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本文引用的文献

1
Modeling covalent-modifier drugs.建模共价修饰药物。
Biochim Biophys Acta Proteins Proteom. 2017 Nov;1865(11 Pt B):1664-1675. doi: 10.1016/j.bbapap.2017.05.009. Epub 2017 May 18.
2
Hepatitis C virus infection.丙型肝炎病毒感染。
Nat Rev Dis Primers. 2017 Mar 2;3:17006. doi: 10.1038/nrdp.2017.6.
3
The NS4A Cofactor Dependent Enhancement of HCV NS3 Protease Activity Correlates with a 4D Geometrical Measure of the Catalytic Triad Region.丙型肝炎病毒NS3蛋白酶活性的NS4A辅因子依赖性增强与催化三联体区域的4D几何测量相关。
Structure. 2019 Aug 6;27(8):1326-1335.e4. doi: 10.1016/j.str.2019.05.012. Epub 2019 Jun 27.
PLoS One. 2016 Dec 9;11(12):e0168002. doi: 10.1371/journal.pone.0168002. eCollection 2016.
4
Global epidemiology of hepatitis C virus infection: An up-date of the distribution and circulation of hepatitis C virus genotypes.丙型肝炎病毒感染的全球流行病学:丙型肝炎病毒基因型分布与传播的最新情况
World J Gastroenterol. 2016 Sep 14;22(34):7824-40. doi: 10.3748/wjg.v22.i34.7824.
5
Irreversible inhibitors of the 3C protease of Coxsackie virus through templated assembly of protein-binding fragments.通过蛋白质结合片段的模板组装得到的柯萨奇病毒3C蛋白酶不可逆抑制剂。
Nat Commun. 2016 Sep 28;7:12761. doi: 10.1038/ncomms12761.
6
Targeted Covalent Inhibitors for Drug Design.靶向共价抑制剂在药物设计中的应用
Angew Chem Int Ed Engl. 2016 Oct 17;55(43):13408-13421. doi: 10.1002/anie.201601091. Epub 2016 Aug 19.
7
Targeting Non-Catalytic Cysteine Residues Through Structure-Guided Drug Discovery.通过结构导向药物发现靶向非催化性半胱氨酸残基
Curr Top Med Chem. 2017;17(1):4-15. doi: 10.2174/1568026616666160719163839.
8
New drug design with covalent modifiers.具有共价修饰剂的新药设计。
Expert Opin Drug Discov. 2016;11(1):79-90. doi: 10.1517/17460441.2016.1115478.
9
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J Med Chem. 2015 Jun 11;58(11):4790-801. doi: 10.1021/acs.jmedchem.5b00466. Epub 2015 May 28.
10
Theory and applications of covalent docking in drug discovery: merits and pitfalls.共价对接在药物发现中的理论与应用:优点与不足
Molecules. 2015 Jan 27;20(2):1984-2000. doi: 10.3390/molecules20021984.