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大规模代谢组学分析鉴定出与类风湿关节炎相关的新型甾体类物质。

Large Scale Metabolic Profiling identifies Novel Steroids linked to Rheumatoid Arthritis.

机构信息

Physiology and Biophysics, Weill Cornell Medical College - Qatar, Education City, Doha, Qatar.

Computer and Systems Engineering, Faculty of Engineering, Alexandria University, Alexandria, Egypt.

出版信息

Sci Rep. 2017 Aug 22;7(1):9137. doi: 10.1038/s41598-017-05439-1.

Abstract

Recent metabolomics studies of Rheumatoid Arthritis (RA) reported few metabolites that were associated with the disease, either due to small cohort sizes or limited coverage of metabolic pathways. Our objective is to identify metabolites associated with RA and its cofounders using a new untargeted metabolomics platform. Moreover, to investigate the pathomechanism of RA by identifying correlations between RA-associated metabolites. 132 RA patients and 104 controls were analyzed for 927 metabolites. Metabolites were tested for association with RA using linear regression. OPLS-DA was used to discriminate RA patients from controls. Gaussian Graphical Models (GGMs) were used to identify correlated metabolites. 32 metabolites are identified as significantly (Bonferroni) associated with RA, including the previously reported metabolites as DHEAS, cortisol and androstenedione and extending that to a larger set of metabolites in the steroid pathway. RA classification using metabolic profiles shows a sensitivity of 91% and specificity of 88%. Steroid levels show variation among the RA patients according to the corticosteroid treatment; lowest in those taking the treatment at the time of the study, higher in those who never took the treatment, and highest in those who took it in the past. Finally, the GGM reflects metabolite relations from the steroidogenesis pathway.

摘要

最近的类风湿关节炎(RA)代谢组学研究报告了一些与疾病相关的代谢物,但由于队列规模较小或代谢途径的覆盖范围有限,这些代谢物的数量很少。我们的目标是使用新的非靶向代谢组学平台来识别与 RA 及其共病相关的代谢物。此外,通过确定与 RA 相关的代谢物之间的相关性,来研究 RA 的发病机制。对 132 名 RA 患者和 104 名对照者的 927 种代谢物进行了分析。使用线性回归检测代谢物与 RA 的关联。使用 OPLS-DA 区分 RA 患者和对照者。使用高斯图形模型(GGM)识别相关代谢物。确定了 32 种代谢物与 RA 显著相关(Bonferroni),包括先前报道的代谢物,如 DHEAS、皮质醇和雄烯二酮,并将其扩展到更大的类固醇途径代谢物集。使用代谢谱进行 RA 分类的灵敏度为 91%,特异性为 88%。根据皮质类固醇治疗,RA 患者的类固醇水平存在差异;在研究时正在接受治疗的患者中最低,从未接受过治疗的患者中较高,过去接受过治疗的患者中最高。最后,GGM 反映了来自类固醇生成途径的代谢物关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/545d/5567269/d109fbcc5668/41598_2017_5439_Fig1_HTML.jpg

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