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新种鞘氨醇单胞菌,从生物土壤结皮中分离得到。

Sphingomonas crusticola sp. nov., isolated from biological soil crusts.

作者信息

Zhang Kaishuai, Tang Kai, Feng Fuying, Yuan Bo, Zhang Xiaojun, Meng Jianyu

机构信息

Institute for Applied and Environmental Microbiology, College of Life Science, Inner Mongolia Agricultural University, Huhhot 010018, PR China.

College of Life Science, Inner Mongolia Normal University, Huhhot 010018, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Aug;67(8):3033-3037. doi: 10.1099/ijsem.0.002074. Epub 2017 Aug 18.

Abstract

A yellow-pigmented, Gram-stain-negative, short-rod-shaped bacterial strain, MIMD3T, was isolated from biological soil crusts collected in Liangcheng, north-western China. Cell growth could be observed at 10-37 °C (optimum 25 °C), at pH 5-8 (optimum 6.6) and in the presence of 1 % (w/v) NaCl (optimum 0 %). The genomic DNA G+C content was 65.0 mol%. Analysis of 16S rRNA gene sequences showed that strain MIMD3T shared the highest similarity with Sphingomonas vulcanisoli KCTC 42454T (95.1 %), Sphingomonas oligophenolica JCM 12082T (94.8 %), Sphingomonas mali IFO 15500T (94.5 %), Sphingomonas. leidyi ATCC 15260T (94.4 %) and Sphingomonas formosensis CC-Nfb-2T (94.3 %). The strain had Q-10 as the predominant respiratory quinone, and sym-homospermidine as the major polyamine. The major fatty acids of the strain were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c), C19 : 0 cyclo ω8c, C14 : 0 2-OH and C16 : 0. The main polar lipids of strain MIMD3T were phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine and sphingoglycolipid. Based on phenotypic, chemotaxonomic and phylogenetic characteristics, it is concluded that strain MIMD3T represents a novel species of the genus Sphingomonas, for which the name Sphingomonas crusticola sp. nov. is proposed. The type strain is MIMD3T (=KCTC 42801T=MCCC 1K01310T).

摘要

从中国西北部凉城采集的生物土壤结皮中分离出一株黄色色素沉着、革兰氏染色阴性、短杆状的细菌菌株MIMD3T。该菌株在10-37°C(最适温度25°C)、pH 5-8(最适pH 6.6)以及1%(w/v)NaCl(最适0%)条件下可生长。基因组DNA的G+C含量为65.0 mol%。16S rRNA基因序列分析表明,菌株MIMD3T与火山鞘氨醇单胞菌KCTC 42454T(95.1%)、寡酚鞘氨醇单胞菌JCM 12082T(94.8%)、苹果鞘氨醇单胞菌IFO 15500T(94.5%)、莱氏鞘氨醇单胞菌ATCC 15260T(94.4%)和台湾鞘氨醇单胞菌CC-Nfb-2T(94.3%)的相似性最高。该菌株以Q-10作为主要呼吸醌,以对称高亚精胺作为主要多胺。该菌株的主要脂肪酸为总和特征8(C18:1ω7c和/或C18:1ω6c)、C19:0环ω8c、C14:0 2-OH和C16:0。菌株MIMD3T的主要极性脂类为磷脂酰乙醇胺、磷脂酰甘油、磷脂酰胆碱和鞘糖脂。基于表型、化学分类和系统发育特征,得出菌株MIMD3T代表鞘氨醇单胞菌属的一个新物种的结论,为此提出新名称鞘氨醇单胞菌结皮icola sp. nov.。模式菌株为MIMD3T(=KCTC 42801T=MCCC 1K01310T)。

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