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微生物聚羟基烷酸酯表面结合蛋白 PhaP 的建模用于合理的突变。

Modelling of microbial polyhydroxyalkanoate surface binding protein PhaP for rational mutagenesis.

机构信息

Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua-Peking Center for Life Sciences, Tsinghua University, Beijing, China.

MOE Laboratory of Protein Science, Beijing Advanced Innovation Center for Structural Biology, Collaborative Innovation Center for Biotherapy, School of Life Sciences, Tsinghua University, Beijing, 100084, China.

出版信息

Microb Biotechnol. 2017 Nov;10(6):1400-1411. doi: 10.1111/1751-7915.12820. Epub 2017 Aug 25.

Abstract

Phasins are unusual amphiphilic proteins that bind to microbial polyhydroxyalkanoate (PHA) granules in nature and show great potential for various applications in biotechnology and medicine. Despite their remarkable diversity, only the crystal structure of PhaP from Aeromonas hydrophila has been solved to date. Based on the structure of PhaP , homology models of PhaP from Azotobacter sp. FA-8 and PhaP from Halomonas bluephagenesis TD were successfully established, allowing rational mutagenesis to be conducted to enhance the stability and surfactant properties of these proteins. PhaP mutants, including PhaP Q38L and PhaP Q78L, as well as PhaP mutants, including PhaP Q38M and PhaP Q72M, showed better emulsification properties and improved thermostability (6-10°C higher melting temperatures) compared with their wild-type homologues under the same conditions. Importantly, the established PhaP homology-modelling approach, based on the high-resolution structure of PhaP , can be generalized to facilitate the study of other PhaP members.

摘要

类蛋白是一种不寻常的两亲性蛋白,它们在自然界中与微生物聚羟基烷酸 (PHA) 颗粒结合,并在生物技术和医学的各种应用中显示出巨大的潜力。尽管它们具有显著的多样性,但迄今为止,只有气单胞菌属的 PhaP 的晶体结构得到了解决。基于 PhaP 的结构,成功建立了固氮菌 FA-8 的 PhaP 和噬蓝菌 TD 的 PhaP 的同源模型,从而可以进行合理的突变,以提高这些蛋白质的稳定性和表面活性剂特性。与野生型同源物相比,PhaP Q38L 和 PhaP Q78L 等 PhaP 突变体以及 PhaP Q38M 和 PhaP Q72M 等 PhaP 突变体在相同条件下表现出更好的乳化性能和提高的热稳定性(融化温度高 6-10°C)。重要的是,基于 PhaP 的高分辨率结构建立的 PhaP 同源建模方法可以推广,以促进其他 PhaP 成员的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f0df/5658623/6fab8bae8cf4/MBT2-10-1400-g001.jpg

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