Institute of Microbiology, University Stuttgart, Stuttgart, Germany.
Environ Microbiol. 2014 Aug;16(8):2357-73. doi: 10.1111/1462-2920.12356. Epub 2014 Jan 21.
The metabolism of polyhydroxybutyrate (PHB) and related polyhydroxyalkanoates (PHAs) has been investigated by many groups for about three decades, and good progress was obtained in understanding the mechanisms of biosynthesis and biodegradation of this class of storage molecules. However, the molecular events that happen at the onset of PHB synthesis and the details of the initiation of PHB/PHA granule formation, as well as the complex composition of the proteinaceous surface layer of PHB/PHA granules, have only recently come into the focus of research and were not reviewed yet. In this contribution, we summarize the progress in understanding the initiation and formation of the PHA granule complex at the example of Ralstonia eutropha H16 (model organism of PHB-accumulating bacteria). Where appropriate, we include information on PHA granules of Pseudomonas putida as a representative species for medium-chain-length PHA-accumulating bacteria. We suggest to replace the previous micelle mode of PHB granule formation by the Scaffold Model in which the PHB synthase initiation complex is bound to the bacterial nucleoid. In the second part, we highlight data on other forms of PHB: oligo-PHB with ≈100 to 200 3-hydroxybutyrate (3HB) units and covalently bound PHB (cPHB) are unrelated in function to storage PHB but are presumably present in all living organisms, and therefore must be of fundamental importance.
聚羟基丁酸酯 (PHB) 和相关的聚羟基烷酸酯 (PHA) 的代谢已经被许多研究小组研究了大约三十年,在理解这一类储存分子的生物合成和生物降解机制方面取得了很好的进展。然而,PHB 合成起始时的分子事件以及 PHB/PHA 颗粒形成的起始的细节,以及 PHB/PHA 颗粒的蛋白质表面层的复杂组成,最近才成为研究的焦点,尚未进行综述。在本文中,我们以 Ralstonia eutropha H16(聚 PHB 细菌的模式生物)为例,总结了对 PHA 颗粒复合物的起始和形成的理解进展。在适当的情况下,我们还包括了 Pseudomonas putida 中 PHA 颗粒的信息,作为中链长聚 PHB 细菌的代表。我们建议用支架模型取代以前的 PHB 颗粒形成的胶束模式,其中 PHB 合酶起始复合物与细菌核体结合。在第二部分,我们强调了其他形式的 PHB 的数据:约 100 到 200 个 3-羟基丁酸 (3HB) 单元的寡聚 PHB 和共价结合的 PHB (cPHB) 在功能上与储存 PHB 无关,但可能存在于所有生物体中,因此必须具有重要意义。