Terrisse Fanny, Cravo-Laureau Cristiana, Noël Cyril, Cagnon Christine, Dumbrell Alex J, McGenity Terry J, Duran Robert
IPREM UMR CNRS 5254, Equipe Environnement et Microbiologie, MELODY Group, Université de Pau et des Pays de l'AdourPau, France.
School of Biological Sciences, University of EssexColchester, United Kingdom.
Front Microbiol. 2017 Aug 16;8:1549. doi: 10.3389/fmicb.2017.01549. eCollection 2017.
Deciphering the ecology of marine obligate hydrocarbonoclastic bacteria (MOHCB) is of crucial importance for understanding their success in occupying distinct niches in hydrocarbon-contaminated marine environments after oil spills. In marine coastal sediments, MOHCB are particularly subjected to extreme fluctuating conditions due to redox oscillations several times a day as a result of mechanical (tide, waves and currents) and biological (bioturbation) reworking of the sediment. The adaptation of MOHCB to the redox oscillations was investigated by an experimental ecology approach, subjecting a hydrocarbon-degrading microbial community to contrasting oxygenation regimes including permanent anoxic conditions, anoxic/oxic oscillations and permanent oxic conditions. The most ubiquitous MOHCB, and , showed different behaviors, especially under anoxic/oxic oscillation conditions, which were more favorable for than for . The micro-diversity of 16S rRNA gene transcripts from these genera revealed specific ecotypes for different oxygenation conditions and their dynamics. It is likely that such ecotypes allow the colonization of distinct ecological niches that may explain the success of and in hydrocarbon-contaminated coastal sediments during oil-spills.
解析海洋专性嗜烃菌(MOHCB)的生态对于理解它们在石油泄漏后成功占据受烃污染海洋环境中不同生态位至关重要。在海洋海岸沉积物中,由于沉积物的机械(潮汐、波浪和水流)和生物(生物扰动)再加工导致每天多次氧化还原振荡,MOHCB特别容易受到极端波动条件的影响。通过实验生态学方法研究了MOHCB对氧化还原振荡的适应性,使一个烃降解微生物群落处于包括永久缺氧条件、缺氧/好氧振荡和永久好氧条件的对比氧合状态下。最普遍的MOHCB, 和 ,表现出不同的行为,特别是在缺氧/好氧振荡条件下,这种条件对 比对 更有利。来自这些属的16S rRNA基因转录本的微观多样性揭示了不同氧合条件下的特定生态型及其动态。很可能这种生态型允许在不同的生态位定殖,这可能解释了 和 在石油泄漏期间受烃污染的海岸沉积物中成功生存的原因。