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脊椎动物溶质载体家族9B基因和蛋白质的进化():来自祖先脊椎动物基因的睾丸特异性基因有袋类起源的证据。

Evolution of Vertebrate Solute Carrier Family 9B Genes and Proteins (): Evidence for a Marsupial Origin for Testis Specific from an Ancestral Vertebrate Gene.

作者信息

Holmes Roger S, Spradling-Reeves Kimberly D, Cox Laura A

机构信息

Eskitis Institute for Drug Discovery and School of Natural Sciences, Griffith University, Nathan, QLD, Australia.

Department of Genetics and Southwest National Primate Research Center, Texas Biomedical Research Institute, San Antonio, Texas, USA.

出版信息

J Phylogenetics Evol Biol. 2016 Aug;4(3). doi: 10.4172/2329-9002.1000167. Epub 2016 Jun 10.

Abstract

genes and proteins are members of the sodium/lithium hydrogen antiporter family which function as solute exchangers within cellular membranes of mammalian tissues. and amino acid sequences and structures and -like gene locations were examined using bioinformatic data from several vertebrate genome projects. Vertebrate sequences shared 56-98% identity as compared with ∼50% identities with mammalian sequences. Sequence alignments, key amino acid residues and conserved predicted transmembrane structures were also studied. Mammalian and genes usually contained 11 or 12 coding exons with differential tissue expression patterns: broad tissue distribution; and , being testis specific. Transcription factor binding sites and CpG islands within the human and gene promoters were identified. Phylogenetic analyses suggested that originated in an ancestral marsupial genome from a gene duplication event.

摘要

基因和蛋白质是钠/锂氢反向转运体家族的成员,它们在哺乳动物组织的细胞膜内作为溶质交换器发挥作用。并且使用来自几个脊椎动物基因组计划的生物信息数据检查了氨基酸序列、结构和类似基因的位置。与哺乳动物序列约50%的同一性相比,脊椎动物序列具有56 - 98%的同一性。还研究了序列比对、关键氨基酸残基和保守的预测跨膜结构。哺乳动物的和基因通常包含11或12个编码外显子,具有不同的组织表达模式:广泛的组织分布;并且,是睾丸特异性的。确定了人类和基因启动子内的转录因子结合位点和CpG岛。系统发育分析表明,起源于有袋类祖先基因组中的一次基因复制事件。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1fa6/5578470/47fe58e16e08/nihms843497f1.jpg

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