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话痨型 PD 通过与解旋酶结构域和双链 RNA 的相互作用促进 Dicer-2 的切割。

Loquacious-PD facilitates Dicer-2 cleavage through interactions with the helicase domain and dsRNA.

机构信息

Department of Biochemistry, University of Utah, Salt Lake City, UT 84112.

Department of Biochemistry, University of Utah, Salt Lake City, UT 84112

出版信息

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):E7939-E7948. doi: 10.1073/pnas.1707063114. Epub 2017 Sep 5.

Abstract

Loquacious-PD (Loqs-PD) is required for biogenesis of many endogenous siRNAs in In vitro, Loqs-PD enhances the rate of dsRNA cleavage by Dicer-2 and also enables processing of substrates normally refractory to cleavage. Using purified components, and Loqs-PD truncations, we provide a mechanistic basis for Loqs-PD functions. Our studies indicate that the 22 amino acids at the C terminus of Loqs-PD, including an FDF-like motif, directly interact with the Hel2 subdomain of Dicer-2's helicase domain. This interaction is RNA-independent, but we find that modulation of Dicer-2 cleavage also requires dsRNA binding by Loqs-PD. Furthermore, while the first dsRNA-binding motif of Loqs-PD is dispensable for enhancing cleavage of optimal substrates, it is essential for enhancing cleavage of suboptimal substrates. Finally, our studies define a previously unrecognized Dicer interaction interface and suggest that Loqs-PD is well positioned to recruit substrates into the helicase domain of Dicer-2.

摘要

Loquacious-PD(Loqs-PD)是许多内源性 siRNA 生物发生所必需的。在体外,Loqs-PD 增强了 Dicer-2 切割双链 RNA 的速度,并且还能够处理通常对切割有抗性的底物。使用纯化的组分和 Loqs-PD 截断物,我们为 Loqs-PD 的功能提供了一个机制基础。我们的研究表明,Loqs-PD 的 C 末端的 22 个氨基酸,包括一个 FDF 样基序,直接与 Dicer-2 的解旋酶结构域的 Hel2 亚结构域相互作用。这种相互作用是 RNA 非依赖性的,但我们发现 Dicer-2 切割的调节还需要 Loqs-PD 与双链 RNA 的结合。此外,虽然 Loqs-PD 的第一个双链 RNA 结合基序对于增强最佳底物的切割不是必需的,但对于增强次优底物的切割是必需的。最后,我们的研究定义了一个以前未被识别的 Dicer 相互作用界面,并表明 Loqs-PD 很好地定位以将底物募集到 Dicer-2 的解旋酶结构域中。

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