Park Sooyeon, Yoon Sun Young, Park Ji-Min, Yoon Jung-Hoon
Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.
Int J Syst Evol Microbiol. 2017 Oct;67(10):4013-4019. doi: 10.1099/ijsem.0.002236. Epub 2017 Sep 12.
A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, designated OITF-22, was isolated from a tidal flat of Oido, an island of South Korea, and subjected to a polyphasic taxonomic study. Strain OITF-22 grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaCl. The phylogenetic trees based on 16S rRNA gene sequences showed that strain OITF-22 fell within the clade comprising the type strains of Polaribacter species. Strain OITF-22 exhibited 16S rRNA gene sequence similarity values of 97.2-99.4 % to the type strains of Polaribacter vadi, P. haliotis, P. atrinae, P. dokdonensis, P. litorisediminis,P. reichenbachii, P. irgensii and P. marinaquae, and of 93.0-96.9 % to the type strains of the other Polaribacter species. Strain OITF-22 contained MK-6 as the predominant menaquinone and iso-C15 : 0 and iso-C15 : 0 3-OH as the major fatty acids. The major polar lipids detected in strain OITF-22 were phosphatidylethanolamine and one unidentified lipid. The DNA G+C content of strain OITF-22 was 32.3 mol% and its DNA-DNA relatedness values with the type strains of the eight phylogenetically most closely related Polaribacter species were 9-32 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain OITF-22 is separated from recognized species of the genus Polaribacter. On the basis of the data presented, strain OITF-22 is considered to represent a novel species of the genus Polaribacter, for which the name Polaribacter insulae sp. nov. is proposed. The type strain is OITF-22 (=KCTC 52658=NBRC 112706).
从韩国岛屿巨济岛的潮滩中分离出一株革兰氏染色阴性、需氧、不运动、卵形或杆状的细菌菌株,命名为OITF-22,并对其进行了多相分类研究。菌株OITF-22在25 °C、pH 7.0 - 8.0以及2.0 - 3.0 %(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的系统发育树表明,菌株OITF-22属于包含极地杆菌属模式菌株的进化分支。菌株OITF-22与极地杆菌属的瓦迪极地杆菌、鲍氏极地杆菌、紫贻贝极地杆菌、独岛极地杆菌、潮间带极地杆菌、赖兴巴赫极地杆菌、伊尔根斯极地杆菌和海洋极地杆菌模式菌株的16S rRNA基因序列相似性值为97.2 - 99.4 %,与其他极地杆菌属模式菌株的相似性值为93.0 - 96.9 %。菌株OITF-22以MK-6作为主要甲基萘醌,以异-C15 : 0和异-C15 : 0 3-OH作为主要脂肪酸。在菌株OITF-22中检测到的主要极性脂类为磷脂酰乙醇胺和一种未鉴定的脂类。菌株OITF-22的DNA G+C含量为32.3 mol%,其与8个系统发育关系最密切的极地杆菌属模式菌株的DNA-DNA杂交值为9 - 32 %。不同的表型特征,以及系统发育和遗传独特性,表明菌株OITF-22与已确认的极地杆菌属物种不同。根据所提供的数据,菌株OITF-22被认为代表了极地杆菌属的一个新物种,为此提出名称极地岛屿杆菌(Polaribacter insulae sp. nov.)。模式菌株为OITF-22(=KCTC 52658=NBRC 112706)。