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全自动化量子化学计算自旋-自旋耦合核磁共振谱。

Fully Automated Quantum-Chemistry-Based Computation of Spin-Spin-Coupled Nuclear Magnetic Resonance Spectra.

机构信息

Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie der Universität Bonn, Beringstrasse 4, 53115, Bonn, Germany.

Max Planck Institute for Chemical Energy Conversion, Stiftstrasse 32-34, 45470, Mülheim an der Ruhr, Germany.

出版信息

Angew Chem Int Ed Engl. 2017 Nov 13;56(46):14763-14769. doi: 10.1002/anie.201708266. Epub 2017 Oct 11.

DOI:10.1002/anie.201708266
PMID:28906074
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5698732/
Abstract

We present a composite procedure for the quantum-chemical computation of spin-spin-coupled H NMR spectra for general, flexible molecules in solution that is based on four main steps, namely conformer/rotamer ensemble (CRE) generation by the fast tight-binding method GFN-xTB and a newly developed search algorithm, computation of the relative free energies and NMR parameters, and solving the spin Hamiltonian. In this way the NMR-specific nuclear permutation problem is solved, and the correct spin symmetries are obtained. Energies, shielding constants, and spin-spin couplings are computed at state-of-the-art DFT levels with continuum solvation. A few (in)organic and transition-metal complexes are presented, and very good, unprecedented agreement between the theoretical and experimental spectra was achieved. The approach is routinely applicable to systems with up to 100-150 atoms and may open new avenues for the detailed (conformational) structure elucidation of, for example, natural products or drug molecules.

摘要

我们提出了一种用于计算溶液中一般柔性分子的自旋-自旋耦合 H NMR 谱的组合量子化学计算方法,该方法基于四个主要步骤,即通过快速紧束缚方法 GFN-xTB 和新开发的搜索算法生成构象/旋转异构体(CRE),计算相对自由能和 NMR 参数,并求解自旋哈密顿量。通过这种方式解决了 NMR 特定的核置换问题,并获得了正确的自旋对称性。采用最先进的 DFT 水平和连续溶剂化计算能量、屏蔽常数和自旋-自旋耦合。我们展示了一些(无机)和过渡金属配合物,理论和实验谱之间达到了前所未有的非常好的一致性。该方法通常适用于多达 100-150 个原子的系统,可能为例如天然产物或药物分子的详细(构象)结构阐明开辟新的途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/8dab8325cdee/ANIE-56-14763-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/0c9ebdaf0374/ANIE-56-14763-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/b35dbd5de813/ANIE-56-14763-g002.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/097d7e0da7b6/ANIE-56-14763-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/8dab8325cdee/ANIE-56-14763-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/0c9ebdaf0374/ANIE-56-14763-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/b35dbd5de813/ANIE-56-14763-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/8873621411ac/ANIE-56-14763-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/92c4f3eca4d9/ANIE-56-14763-g004.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47ef/5698732/8dab8325cdee/ANIE-56-14763-g006.jpg

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