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使用Fun30进行转录很有趣:一种RNA聚合酶II介导的延伸过程中核小体动力学模型。

It's fun to transcribe with Fun30: A model for nucleosome dynamics during RNA polymerase II-mediated elongation.

作者信息

Lee Junwoo, Choi Eun Shik, Lee Daeyoup

机构信息

a Department of Biological Sciences , Korea Advanced Institute of Science and Technology , Daejeon , South Korea.

出版信息

Transcription. 2018;9(2):108-116. doi: 10.1080/21541264.2017.1356434. Epub 2017 Oct 4.

Abstract

The ability of elongating RNA polymerase II (RNAPII) to regulate the nucleosome barrier is poorly understood because we do not know enough about the involved factors and we lack a conceptual framework to model this process. Our group recently identified the conserved Fun30/SMARCAD1 family chromatin-remodeling factor, Fun30, as being critical for relieving the nucleosome barrier during RNAPII-mediated elongation, and proposed a model illustrating how Fun30 may contribute to nucleosome disassembly during RNAPII-mediated elongation. Here, we present a model that describes nucleosome dynamics during RNAPII-mediated elongation in mathematical terms and addresses the involvement of Fun30 in this process.

摘要

由于我们对相关因子了解不足,且缺乏对这一过程进行建模的概念框架,所以对于延伸中的RNA聚合酶II(RNAPII)调节核小体屏障的能力知之甚少。我们团队最近鉴定出保守的Fun30/SMARCAD1家族染色质重塑因子Fun30,它对于在RNAPII介导的延伸过程中解除核小体屏障至关重要,并提出了一个模型来说明Fun30在RNAPII介导的延伸过程中如何促进核小体解聚。在此,我们提出一个以数学术语描述RNAPII介导的延伸过程中核小体动态变化的模型,并探讨了Fun30在此过程中的作用。

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