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优化植物组织中染色体研究的细胞铺展和图像质量

Optimization of Cell Spreading and Image Quality for the Study of Chromosomes in Plant Tissues.

作者信息

Kantama Laksana, Wijnker Erik, de Jong Hans

机构信息

Faculty of Liberal Arts and Science, Kasetsart University, Kamphaeng Saen Campus, Kamphaeng Saen, 73140, Nakhon Pathom, Thailand.

Laboratory of Genetics, Wageningen University and Research, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands.

出版信息

Methods Mol Biol. 2017;1669:141-158. doi: 10.1007/978-1-4939-7286-9_12.

DOI:10.1007/978-1-4939-7286-9_12
PMID:28936656
Abstract

High-quality chromosome images of mitotic and meiotic cell divisions in plant tissues are inextricably connected with the technical control of cell spread preparations. Superb chromosome slides are the best for studying chromosome morphology and making karyotypes; they also are the best start for a successful fluorescent in situ hybridization experiment. In this study, we describe the essentials for fixation, enzymatic digestion, squash, spread, and dropping protocols for clean and well-differentiated nuclei and chromosome complements. In addition, we focus on the use of standard whole image processing for best sharpness, brightness and contrast adjustments, differentiation of heterochromatin/euchromatin, and high dynamic range imaging of big chromosomes. We also explain how to combine transparent layers or spot channels of different fluorescent images for making publication quality, full color photos.

摘要

植物组织有丝分裂和减数分裂细胞分裂的高质量染色体图像与细胞铺展制片的技术控制紧密相连。优质的染色体玻片最适合用于研究染色体形态和制作核型;它们也是成功进行荧光原位杂交实验的最佳开端。在本研究中,我们描述了用于获得清晰且分化良好的细胞核及染色体组型的固定、酶解、压片、铺展和滴片方案的要点。此外,我们着重介绍了使用标准的全图像处理来进行最佳的清晰度、亮度和对比度调整、异染色质/常染色质的区分以及大染色体的高动态范围成像。我们还解释了如何将不同荧光图像的透明层或斑点通道进行组合,以制作出具有出版质量的全彩照片。

相似文献

1
Optimization of Cell Spreading and Image Quality for the Study of Chromosomes in Plant Tissues.优化植物组织中染色体研究的细胞铺展和图像质量
Methods Mol Biol. 2017;1669:141-158. doi: 10.1007/978-1-4939-7286-9_12.
2
Preparation of Mitotic Chromosomes with the Squash Technique.有丝分裂染色体的压片技术制备。
Methods Mol Biol. 2023;2672:141-149. doi: 10.1007/978-1-0716-3226-0_7.
3
Preparation of Mitotic Chromosomes with the Dropping Technique.滴片法制备有丝分裂染色体。
Methods Mol Biol. 2023;2672:151-162. doi: 10.1007/978-1-0716-3226-0_8.
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Heterochromatin and rDNA sites distribution in the holocentric chromosomes of Cuscuta approximata Bab. (Convolvulaceae).菟丝子(旋花科)全着丝粒染色体中异染色质和核糖体DNA位点的分布
Genome. 2004 Feb;47(1):134-40. doi: 10.1139/g03-098.
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An overview of plant chromosome structure.植物染色体结构概述。
Cytogenet Genome Res. 2008;120(3-4):194-201. doi: 10.1159/000121067. Epub 2008 May 22.
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Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence of sequence similarity in the pericentromeric heterochromatin.马铃薯5号染色体的同源物在常染色质中显示出可变的共线性,但在着丝粒周围异染色质中序列相似性显著缺失。
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Chromosomes with a life of their own.拥有自身生命周期的染色体。
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Using chromosomal data in the phylogenetic and molecular dating framework: karyotype evolution and diversification in Nierembergia (Solanaceae) influenced by historical changes in sea level.在系统发育和分子年代测定框架中使用染色体数据:受海平面历史变化影响的紫杯花属(茄科)核型进化与多样化
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[Trans-effect of modifiers on position-effect variegation in a set of euchromatin-heterochromatin rearrangements in Drosophila melanogaster].[修饰因子对黑腹果蝇一组常染色质-异染色质重排中位置效应斑驳的反式作用]
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Meiotic recombination is suppressed near the histone-defined border of euchromatin and heterochromatin on chromosome 2L of Drosophila melanogaster.在黑腹果蝇2L染色体上,减数分裂重组在常染色质和异染色质由组蛋白定义的边界附近受到抑制。
Genome. 2016 Apr;59(4):289-94. doi: 10.1139/gen-2015-0171.

引用本文的文献

1
Critical Steps in DAPI and FISH Imaging of Chromosome Spread Preparations.DAPI 和 FISH 成像染色体铺片制备的关键步骤。
Methods Mol Biol. 2023;2672:247-256. doi: 10.1007/978-1-0716-3226-0_15.
2
2D morphometric analysis of Arabidopsis thaliana nuclei reveals characteristic profiles of different cell types and accessions.拟南芥核的 2D 形态计量分析揭示了不同细胞类型和品系的特征图谱。
Chromosome Res. 2022 Mar;30(1):5-24. doi: 10.1007/s10577-021-09673-2. Epub 2021 Oct 19.