Division of Nephrology, The First Affiliated Hospital of China Medical University, Shenyang, Liaoning 110001, P.R. China.
Division of Nephrology, The People's Hospital of Tacheng, Tacheng, Xinjiang 834700, P.R. China.
Mol Med Rep. 2017 Nov;16(5):7724-7730. doi: 10.3892/mmr.2017.7542. Epub 2017 Sep 20.
Long non‑coding RNAs (lncRNAs) have been reported to serve a crucial role in renal diseases; however, their role in immunoglobulin A nephropathy (IgAN) remains unclear. In the present study, peripheral blood mononuclear cells (PBMCs) were collected from both patients with IgAN and healthy controls. A microarray analysis was then performed to identify differentially expressed lncRNAs and mRNAs in PBMCs, which were confirmed by quantitative polymerase chain reaction. In addition, Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and lncRNA‑mRNA co‑expression network analyses were conducted. The present study identified 167 differentially expressed lncRNAs and 94 differentially expressed mRNAs. Numerous GO terms, including innate immune response, inflammatory response, IPAF inflammasome complex and UDP‑galactose:β‑N‑acetylglucosamine β‑1, and 3‑galactosyltransferase activity, were significantly enriched in the differentially expressed mRNAs. The top five KEGG signaling pathways included nucleotide‑binding oligomerization domain‑like receptor signaling pathway, hematopoietic cell lineage, inflammatory bowel disease, tumor necrosis factor signaling pathway and other types of O‑glycan biosynthesis. In addition, a total of 149 lncRNAs were shown to interact with 7 mRNAs that were associated with the 'innate immune response' GO term. The results of the present study demonstrated that differentially expressed lncRNAs and mRNAs may have a role in the development of IgAN. These results may aid in the elucidation of a basic pathogenic mechanism, the identification of possible biomarkers and the generation of potential novel treatment strategies for IgAN.
长链非编码 RNA(lncRNA)已被报道在肾脏疾病中发挥关键作用;然而,它们在免疫球蛋白 A 肾病(IgAN)中的作用仍不清楚。本研究收集了 IgAN 患者和健康对照者的外周血单个核细胞(PBMC)。然后进行微阵列分析以鉴定 PBMC 中差异表达的 lncRNA 和 mRNA,并通过定量聚合酶链反应进行验证。此外,还进行了基因本体论(GO)、京都基因与基因组百科全书(KEGG)通路和 lncRNA-mRNA 共表达网络分析。本研究鉴定出 167 个差异表达的 lncRNA 和 94 个差异表达的 mRNA。GO 术语包括固有免疫反应、炎症反应、IPAFA 炎性小体复合物和 UDP-半乳糖:β-N-乙酰氨基葡萄糖β-1,3-半乳糖基转移酶活性,在差异表达的 mRNAs 中显著富集。前 5 个 KEGG 信号通路包括核苷酸结合寡聚结构域样受体信号通路、造血细胞谱系、炎症性肠病、肿瘤坏死因子信号通路和其他类型的 O-聚糖生物合成。此外,总共 149 个 lncRNA 与与“固有免疫反应”GO 术语相关的 7 个 mRNA 相互作用。本研究的结果表明,差异表达的 lncRNA 和 mRNA 可能在 IgAN 的发生发展中发挥作用。这些结果可能有助于阐明基本的发病机制、鉴定可能的生物标志物和为 IgAN 生成潜在的新型治疗策略。