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拟南芥 MOS4 相关复合物促进 microRNA 生物发生和前体信使 RNA 剪接。

The Arabidopsis MOS4-Associated Complex Promotes MicroRNA Biogenesis and Precursor Messenger RNA Splicing.

机构信息

Department of Botany and Plant Sciences, Institute of Integrative Genome Biology, University of California, Riverside, California 92521.

Guangdong Provincial Key Laboratory for Plant Epigenetics, Longhua Institute of Innovative Biotechnology, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China.

出版信息

Plant Cell. 2017 Oct;29(10):2626-2643. doi: 10.1105/tpc.17.00370. Epub 2017 Sep 25.

Abstract

In , the MOS4-ASSOCIATED COMPLEX (MAC) is required for defense and development. The evolutionarily conserved, putative RNA helicase MAC7 is a component of the Arabidopsis MAC, and the human MAC7 homolog, Aquarius, is implicated in pre-mRNA splicing. Here, we show that , a partial loss-of-function mutant in , and two other MAC subunit mutants, and (), exhibit reduced microRNA (miRNA) levels, indicating that MAC promotes miRNA biogenesis. The mutant shows reduced primary miRNA (pri-miRNA) levels without affecting miRNA gene () promoter activity or the half-life of pri-miRNA transcripts. As a nuclear protein, MAC7 is not concentrated in dicing bodies, but it affects the localization of HYPONASTIC LEAVES1 (HYL1), a key protein in pri-miRNA processing, to dicing bodies. Immunoprecipitation of HYL1 retrieved 11 known MAC subunits, including MAC7, indicating association between HYL1 and MAC. We propose that MAC7 links transcription to pri-miRNA processing. RNA-seq analysis showed that downregulated genes in MAC subunit mutants are mostly involved in plant defense and stimulus responses, confirming a role of MAC in biotic and abiotic stress responses. We also discovered global intron retention defects in mutants in three subunits of MAC, thus linking MAC function to splicing in Arabidopsis.

摘要

在中,MOS4 相关复合物(MAC)是防御和发育所必需的。进化上保守的假定 RNA 解旋酶 MAC7 是拟南芥 MAC 的一个组成部分,而人类 MAC7 同源物 Aquarius 则与前体 mRNA 剪接有关。在这里,我们表明,作为 MAC 的一个部分功能丧失突变体,以及另外两个 MAC 亚基突变体和(),表现出降低的 microRNA(miRNA)水平,表明 MAC 促进 miRNA 的生物发生。突变体显示出减少的初级 miRNA(pri-miRNA)水平,而不影响 miRNA 基因()启动子活性或 pri-miRNA 转录本的半衰期。作为一种核蛋白,MAC7 不会集中在剪接体中,但它会影响关键的 pri-miRNA 加工蛋白 HYPONASTIC LEAVES1(HYL1)向剪接体的定位。HYL1 的免疫沉淀回收了 11 个已知的 MAC 亚基,包括 MAC7,表明 HYL1 和 MAC 之间存在关联。我们提出 MAC7 将转录与 pri-miRNA 加工联系起来。RNA-seq 分析表明,MAC 亚基突变体中下调的基因主要涉及植物防御和刺激反应,证实了 MAC 在生物和非生物胁迫反应中的作用。我们还发现,在三个 MAC 亚基的突变体中存在全局内含子保留缺陷,从而将 MAC 功能与拟南芥中的剪接联系起来。

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