Burén Stefan, Jiang Xi, López-Torrejón Gema, Echavarri-Erasun Carlos, Rubio Luis M
Centro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA)Madrid, Spain.
Front Plant Sci. 2017 Sep 12;8:1567. doi: 10.3389/fpls.2017.01567. eCollection 2017.
Active NifB is a milestone in the process of engineering nitrogen fixing plants. NifB is an extremely O-sensitive -adenosyl methionine (SAM)-radical enzyme that provides the key metal cluster intermediate (NifB-co) for the biosyntheses of the active-site cofactors of all three types of nitrogenases. NifB and NifB-co are unique to diazotrophic organisms. In this work, we have expressed synthetic codon-optimized versions of NifB from the γ-proteobacterium and the thermophilic methanogen in and in . NifB proteins were targeted to the mitochondria, where O consumption is high and bacterial-like [Fe-S] cluster assembly operates. In yeast, NifB proteins were co-expressed with NifU, NifS, and FdxN proteins that are involved in NifB [Fe-S] cluster assembly and activity. The synthetic version of thermophilic NifB accumulated in soluble form within the yeast cell, while the version appeared to form aggregates. Similarly, NifB from was expressed at higher levels in leaves of and accumulated as a soluble protein while NifB was mainly associated with the non-soluble cell fraction. Soluble NifB was purified from aerobically grown yeast and biochemically characterized. The purified protein was functional in the FeMo-co synthesis assay. This work presents the first active NifB protein purified from a eukaryotic cell, and highlights the importance of screening genes from different organisms in order to sort the best candidates to assemble a functional plant nitrogenase.
活性NifB是工程固氮植物过程中的一个里程碑。NifB是一种对氧气极度敏感的S-腺苷甲硫氨酸(SAM)自由基酶,它为所有三种类型固氮酶活性位点辅因子的生物合成提供关键金属簇中间体(NifB-co)。NifB和NifB-co是固氮生物所特有的。在这项工作中,我们在大肠杆菌和酿酒酵母中表达了来自γ-变形菌和嗜热产甲烷菌的经密码子优化的合成NifB版本。NifB蛋白被靶向到线粒体,线粒体中氧气消耗高且存在类似细菌的[Fe-S]簇组装过程。在酵母中,NifB蛋白与参与NifB [Fe-S]簇组装和活性的NifU、NifS和FdxN蛋白共表达。嗜热NifB的合成版本以可溶形式在酵母细胞内积累,而大肠杆菌版本似乎形成聚集体。同样,来自大肠杆菌的NifB在烟草叶片中表达水平更高,并以可溶性蛋白形式积累,而嗜热产甲烷菌的NifB主要与不溶性细胞部分相关。从需氧生长的酵母中纯化出可溶性嗜热产甲烷菌NifB并进行了生化表征。纯化后的蛋白在铁钼辅因子合成测定中具有功能。这项工作展示了首个从真核细胞中纯化得到的活性NifB蛋白,并强调了从不同生物体中筛选NifB基因以挑选出组装功能性植物固氮酶的最佳候选基因的重要性。