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功能基因组学黄金时代的一颗银弹:介导的真菌转化的影响。

A silver bullet in a golden age of functional genomics: the impact of -mediated transformation of fungi.

作者信息

Idnurm Alexander, Bailey Andy M, Cairns Timothy C, Elliott Candace E, Foster Gary D, Ianiri Giuseppe, Jeon Junhyun

机构信息

School of BioSciences, University of Melbourne, Melbourne, VIC 3010 Australia.

School of Biological Sciences, University of Bristol, Bristol, UK.

出版信息

Fungal Biol Biotechnol. 2017 Sep 26;4:6. doi: 10.1186/s40694-017-0035-0. eCollection 2017.

Abstract

The implementation of as a transformation tool revolutionized approaches to discover and understand gene functions in a large number of fungal species. mediated transformation (MT) is one of the most transformative technologies for research on fungi developed in the last 20 years, a development arguably only surpassed by the impact of genomics. MT has been widely applied in forward genetics, whereby generation of strain libraries using random T-DNA insertional mutagenesis, combined with phenotypic screening, has enabled the genetic basis of many processes to be elucidated. Alternatively, MT has been fundamental for reverse genetics, where mutant isolates are generated with targeted gene deletions or disruptions, enabling gene functional roles to be determined. When combined with concomitant advances in genomics, both forward and reverse approaches using MT have enabled complex fungal phenotypes to be dissected at the molecular and genetic level. Additionally, in several cases MT has paved the way for the development of new species to act as models for specific areas of fungal biology, particularly in plant pathogenic ascomycetes and in a number of basidiomycete species. Despite its impact, the implementation of MT has been uneven in the fungi. This review provides insight into the dynamics of expansion of new research tools into a large research community and across multiple organisms. As such, MT in the fungi, beyond the demonstrated and continuing power for gene discovery and as a facile transformation tool, provides a model to understand how other technologies that are just being pioneered, e.g. CRISPR/Cas, may play roles in fungi and other eukaryotic species.

摘要

作为一种转化工具的应用彻底改变了在大量真菌物种中发现和理解基因功能的方法。介导转化(MT)是过去20年中开发的用于真菌研究的最具变革性的技术之一,其发展的影响力可以说仅次于基因组学。MT已广泛应用于正向遗传学,通过使用随机T-DNA插入诱变产生菌株文库,并结合表型筛选,能够阐明许多过程的遗传基础。另外,MT对于反向遗传学至关重要,在反向遗传学中通过靶向基因缺失或破坏产生突变分离株,从而能够确定基因的功能作用。当与基因组学的同步进展相结合时,使用MT的正向和反向方法都能够在分子和遗传水平上剖析复杂的真菌表型。此外,在一些情况下,MT为开发新物种作为真菌生物学特定领域的模型铺平了道路,特别是在植物病原子囊菌和一些担子菌物种中。尽管MT具有影响力,但它在真菌中的应用并不均衡。本综述深入探讨了新研究工具在大型研究群体和多种生物体中的扩展动态。因此,真菌中的MT,除了已证明的和持续的基因发现能力以及作为一种便捷的转化工具外,还提供了一个模型,用于理解其他刚刚被开创的技术,例如CRISPR/Cas,如何在真菌和其他真核生物物种中发挥作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f107/5615635/199df0bc81c3/40694_2017_35_Fig1_HTML.jpg

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