致癌转录本中调控滞留内含子的协同剪接在恶性胶质瘤中产生了一个可利用的脆弱点。

Coordinated Splicing of Regulatory Detained Introns within Oncogenic Transcripts Creates an Exploitable Vulnerability in Malignant Glioma.

作者信息

Braun Christian J, Stanciu Monica, Boutz Paul L, Patterson Jesse C, Calligaris David, Higuchi Fumi, Neupane Rachit, Fenoglio Silvia, Cahill Daniel P, Wakimoto Hiroaki, Agar Nathalie Y R, Yaffe Michael B, Sharp Phillip A, Hemann Michael T, Lees Jacqueline A

机构信息

The David H. Koch Institute for Integrative Cancer Research and Department of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA.

Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Cancer Cell. 2017 Oct 9;32(4):411-426.e11. doi: 10.1016/j.ccell.2017.08.018. Epub 2017 Sep 28.

Abstract

Glioblastoma (GBM) is a devastating malignancy with few therapeutic options. We identify PRMT5 in an in vivo GBM shRNA screen and show that PRMT5 knockdown or inhibition potently suppresses in vivo GBM tumors, including patient-derived xenografts. Pathway analysis implicates splicing in cellular PRMT5 dependency, and we identify a biomarker that predicts sensitivity to PRMT5 inhibition. We find that PRMT5 deficiency primarily disrupts the removal of detained introns (DIs). This impaired DI splicing affects proliferation genes, whose downregulation coincides with cell cycle defects, senescence and/or apoptosis. We further show that DI programs are evolutionarily conserved and operate during neurogenesis, suggesting that they represent a physiological regulatory mechanism. Collectively, these findings reveal a PRMT5-regulated DI-splicing program as an exploitable cancer vulnerability.

摘要

胶质母细胞瘤(GBM)是一种极具毁灭性的恶性肿瘤,治疗选择有限。我们在一项体内GBM的shRNA筛选中鉴定出PRMT5,并表明PRMT5基因敲低或抑制可有效抑制体内GBM肿瘤,包括患者来源的异种移植物。通路分析表明剪接与细胞对PRMT5的依赖性有关,并且我们鉴定出一种可预测对PRMT5抑制敏感性的生物标志物。我们发现PRMT5缺陷主要会破坏滞留内含子(DI)的去除。这种受损的DI剪接会影响增殖基因,其下调与细胞周期缺陷、衰老和/或凋亡同时发生。我们进一步表明,DI程序在进化上是保守的,并且在神经发生过程中起作用,这表明它们代表一种生理调节机制。总体而言,这些发现揭示了一种PRMT5调节的DI剪接程序是一种可利用的癌症脆弱点。

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