Dasch James R, Dasch Amy L
Cold Spring Harb Protoc. 2017 Oct 3;2017(10):pdb.prot093880. doi: 10.1101/pdb.prot093880.
Many hybridoma researchers have lost an important hybridoma because of instability, mechanical breakdown of a freezer, or contamination. In many cases, however, it is possible to retrieve the heavy- and light-chain sequences from those hybridomas. Although most cloning methods associated with isolation of VH or VL gene sequences require the isolation of intact, nondegraded mRNA, alternative approaches based on genomic DNA have been reported. With genomic DNA, the DNA sample can remain relatively intact in cases in which the mRNA has been degraded. If intact DNA can be obtained from a nonviable hybridoma, the method described here can be used to recover the heavy- and light-chain sequences. The method uses PCR based on a combination of primers in the 5' untranslated region of VH and VL and in the JH and JL segments. Although a relatively large number of primers are required for this method, the ability to obtain a full-length V gene without having intact mRNA could be of general interest for rescuing lost hybridomas.
许多杂交瘤研究人员都曾因细胞系不稳定、冰箱机械故障或污染而失去重要的杂交瘤细胞系。然而,在许多情况下,从这些杂交瘤细胞中检索重链和轻链序列是可能的。尽管大多数与VH或VL基因序列分离相关的克隆方法都需要分离完整、未降解的mRNA,但也有基于基因组DNA的替代方法被报道。对于基因组DNA,在mRNA已降解的情况下,DNA样本仍可保持相对完整。如果能从无法存活的杂交瘤中获得完整的DNA,那么这里描述的方法可用于恢复重链和轻链序列。该方法基于VH和VL的5'非翻译区以及JH和JL片段中的引物组合进行PCR。虽然此方法需要相对大量的引物,但在没有完整mRNA的情况下获得全长V基因的能力对于挽救丢失的杂交瘤细胞系可能具有普遍意义。