Lee Shin Ae, Kim Jeong Myeong, Cho Hayoung, Kim Soo-Jin, Ahn Jae-Hyung, Hamada Moriyuki, Kwon Soon-Wo, Weon Hang-Yeon
Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju-gun, Jeollabuk-do 55365, Republic of Korea.
NITE Biological Resource Center (NBRC), National Institute of Technology and Evaluation, 2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan.
Int J Syst Evol Microbiol. 2017 Nov;67(11):4546-4551. doi: 10.1099/ijsem.0.002329. Epub 2017 Oct 6.
A novel actinomycete strain, designated KIS14-16, was isolated from forest soil in Ongjin county, South Korea and characterized using polyphasic taxonomy. The cells are aerobic, Gram-stain-positive, non-flagellated and short rods. The strain grew in a temperature range of 4-33 °C (optimum, 28-30 °C) and pH range of 5.0-10.0 (optimum, 7.0) and in the presence of 0-5 % (w/v) NaCl (optimum, 0 %). Comparison of 16S rRNA gene sequences showed that strain KIS14-16 is a member of the genus Arthrobacter exhibiting high sequence similarity with A. livingstonensis LI2 (97.7 %), A. cryoconiti Cr6-08 (97.6 %), A. psychrochitiniphilus GP3 (97.4 %), A. stackebrandtii CCM 2783 (97.1 %) and A. globiformis DSM 20124 (96.3 %). DNA-DNA relatedness and phenotypic data distinguished strain KIS14-16 from phylogenetically related type strains. The peptidoglycan type of strain KIS14-16 was A3α, with an interpeptide bridge comprising l-Lys, l-Thr, Gly and l-Ala4. Strain KIS14-16 contained a large amount of MK-9(H2) and relatively small amounts of MK-10(H2) and MK-8(H2). The main polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol and dimannosylglyceride. The major fatty acids (>10 %) were anteiso-C15 : 0 and anteiso-C17 : 0. The genomic DNA G+C content was 63.9 mol%. On the basis of these phenotypic, chemotaxonomic and phylogenetic data, strain KIS14-16 should be designated as a representative novel species of the genus Arthrobacter, for which the name Arthrobacter silviterrae sp. nov. is proposed. The type strain is KIS14-16 (=KACC 17303=DSM 27180=NBRC 109660).
从韩国瓮津郡森林土壤中分离出一株新型放线菌菌株,命名为KIS14 - 16,并采用多相分类法对其进行了特征描述。该菌为需氧菌,革兰氏染色阳性,无鞭毛,呈短杆状。该菌株在4 - 33°C(最适温度为28 - 30°C)的温度范围内、pH值为5.0 - 10.0(最适pH值为7.0)以及0 - 5%(w/v)NaCl(最适浓度为0%)的条件下均可生长。16S rRNA基因序列比较表明,菌株KIS14 - 16是节杆菌属的成员,与利文斯顿节杆菌LI2(97.7%)、嗜冷节杆菌Cr6 - 08(97.6%)、嗜冷嗜几丁质节杆菌GP3(97.4%)、施氏节杆菌CCM 2783(97.1%)和球形节杆菌DSM 20124(96.3%)具有较高的序列相似性。DNA - DNA相关性和表型数据将菌株KIS14 - 16与系统发育相关的模式菌株区分开来。菌株KIS14 - 16的肽聚糖类型为A3α,其肽间桥由l - Lys、l - Thr、Gly和l - Ala4组成。菌株KIS14 - 16含有大量的MK - 9(H2)以及相对少量的MK - 10(H2)和MK - 8(H2)。主要极性脂为双磷脂酰甘油、磷脂酰甘油、磷脂酰肌醇和二甘露糖基甘油酯。主要脂肪酸(>10%)为anteiso - C15 : 0和anteiso - C17 : 0。基因组DNA的G + C含量为63.9 mol%。基于这些表型、化学分类和系统发育数据,菌株KIS14 - 16应被指定为节杆菌属的一个代表性新物种,提议将其命名为林地节杆菌(Arthrobacter silviterrae sp. nov.)。模式菌株为KIS14 - 16(=KACC 17303 = DSM 27180 = NBRC 109660)。