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研究急性髓系白血病中的微小RNA-信使核糖核酸调控网络。

Investigating the microRNA-mRNA regulatory network in acute myeloid leukemia.

作者信息

Zhang Haiguo, Zhang Chengfang, Feng Rui, Zhang Haixia, Gao Min, Ye Ling

机构信息

Department of Hematology, Qilu Hospital, Shandong University, Jinan, Shandong 250012, P.R. China.

Department of Hematology, Jining No. 1 People's Hospital, Jining, Shandong 272011, P.R. China.

出版信息

Oncol Lett. 2017 Oct;14(4):3981-3988. doi: 10.3892/ol.2017.6686. Epub 2017 Jul 28.

Abstract

Acute myeloid leukemia (AML) is a common myelogenous malignancy in adults that is often characterized by disease relapse. The pathophysiological mechanism of AML has not yet been elucidated. The present study aimed to identify the crucial microRNAs (miRNAs/miRs) and target genes in AML, and to uncover the potential oncogenic mechanism of AML. miRNA and mRNA expression-profiling microarray datasets were downloaded from the Gene Expression Omnibus database. Differential expression analysis was performed and a regulatory network between miRNAs and target genes was constructed. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses were used to predict the biological functions of the differentially expressed genes. Reverse transcription-quantitative polymerase chain reaction analysis was employed to verify the expression levels of miRNAs and target genes in AML patient samples. A total of 86 differentially expressed miRNAs and 468 differentially expressed mRNAs between AML and healthy blood samples were identified. In total, 47 miRNAs and 401 mRNAs were found to be upregulated, and 39 miRNAs and 67 mRNAs were found to be downregulated in AML. A total of 223 miRNA-target genes pairs were subjected to the construction of a regulatory network. Differentially expressed target genes were significantly enriched in the Wnt signaling pathway (hsa04310), melanogenesis (hsa04916) and pathways in cancer (hsa05200). Significantly differentially expressed miRNAs and genes, including hsa-miR-155, hsa-miR-192, annexin A2 (), frizzled class receptor 3 (), and pleomorphic adenoma gene 1 (), may serve essential roles in AML oncogenesis. Overall, hsa-miR-155, hsa-miR-192, , and may be associated with the development of AML via the involvement of the Wnt signaling pathway, melanogenesis and other cancer-associated signaling pathways.

摘要

急性髓系白血病(AML)是成人中常见的髓系恶性肿瘤,其特征通常为疾病复发。AML的病理生理机制尚未阐明。本研究旨在鉴定AML中的关键微小RNA(miRNA/miR)和靶基因,并揭示AML潜在的致癌机制。从基因表达综合数据库下载miRNA和mRNA表达谱微阵列数据集。进行差异表达分析并构建miRNA与靶基因之间的调控网络。采用基因本体论和京都基因与基因组百科全书通路富集分析来预测差异表达基因的生物学功能。运用逆转录定量聚合酶链反应分析来验证AML患者样本中miRNA和靶基因的表达水平。在AML与健康血液样本之间共鉴定出86个差异表达的miRNA和468个差异表达的mRNA。总共发现47个miRNA和401个mRNA在AML中上调,39个miRNA和67个mRNA在AML中下调。共223对miRNA-靶基因用于构建调控网络。差异表达的靶基因在Wnt信号通路(hsa04310)、黑色素生成(hsa04916)和癌症通路(hsa05200)中显著富集。包括hsa-miR-155、hsa-miR-192、膜联蛋白A2()、卷曲蛋白家族受体3()和多形性腺瘤基因1()在内的显著差异表达的miRNA和基因可能在AML肿瘤发生中起重要作用。总体而言,hsa-miR-155、hsa-miR-192、 和 可能通过参与Wnt信号通路、黑色素生成及其他癌症相关信号通路与AML的发生发展相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e57b/5620483/4a4be9cf5be1/ol-14-04-3981-g00.jpg

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