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基因组大小与对X射线所致DNA损伤的敏感性——植物彗星实验说明了一切。

Genome size and sensitivity to DNA damage by X-rays-plant comets tell the story.

作者信息

Einset John, Collins Andrew R

机构信息

Department of Nutrition, Faculty of Medicine, University of Oslo, Oslo, Norway.

出版信息

Mutagenesis. 2018 Feb 24;33(1):49-51. doi: 10.1093/mutage/gex029.

Abstract

Among several factors affecting radiation sensitivity, genome size has received limited attention during the last 50 years since research at Brookhaven National Laboratory (USA) and other locations demonstrated substantial differences in radiation sensitivities, e.g. between tree species with large (e.g. conifers such as pines) versus small (e.g. dicots such as oaks) genome sizes. Taking advantage of the wide range of genome sizes among species, we investigated radiation sensitivity which we define in this study as DNA damage (break frequency) measured with the alkaline comet assay in isolated nuclei exposed to X-rays. As a starting point, we considered two possible explanations for the high radiation sensitivity of plants with large genome sizes: (i) inherently higher sensitivity of larger genomes and/or (ii) impaired DNA repair. In terms of genome size effects, experiments exposing isolated nuclei from six different plant species to X-rays, varying in genome sizes from 2.6 to 19.2 Gbp, showed that larger genomes are more sensitive to DNA damage by a relationship approximating the cube-root of the nuclear volume; e.g. a 10-fold increase in genome size increases sensitivity by about 2-fold. With regard to DNA repair, two conifer species, Sawara cypress (Chamaecyparis pisifera, 8.9 Gbp genome size) and Scots pine (Pinus sylvestris, 20 Gbp genome size), both effectively repaired DNA damage within 50 and 70 min, respectively, after acute X-ray exposures. Both species also showed delayed repair of double-strand DNA breaks, as we previously showed with Arabidopsis thaliana and Lolium multiflorum.

摘要

在影响辐射敏感性的几个因素中,自美国布鲁克海文国家实验室及其他机构的研究表明不同物种(如基因组较大的树种,如松树等针叶树;以及基因组较小的树种,如橡树等双子叶植物)的辐射敏感性存在显著差异以来,在过去50年里,基因组大小受到的关注有限。利用物种间广泛的基因组大小差异,我们研究了辐射敏感性,在本研究中我们将其定义为用碱性彗星试验在暴露于X射线的分离细胞核中测量的DNA损伤(断裂频率)。作为出发点,我们考虑了两种对于基因组较大的植物具有高辐射敏感性的可能解释:(i)较大基因组本身具有更高的敏感性和/或(ii)DNA修复受损。就基因组大小的影响而言,将来自六种不同植物物种、基因组大小从2.6 Gbp到19.2 Gbp不等的分离细胞核暴露于X射线的实验表明,较大的基因组对DNA损伤更敏感,其关系近似于核体积的立方根;例如,基因组大小增加10倍,敏感性增加约2倍。关于DNA修复,两种针叶树物种,日本扁柏(Chamaecyparis pisifera,基因组大小8.9 Gbp)和欧洲赤松(Pinus sylvestris,基因组大小20 Gbp),在急性X射线照射后分别在50分钟和70分钟内有效修复了DNA损伤。这两个物种还表现出双链DNA断裂的修复延迟,正如我们之前在拟南芥和多花黑麦草中所表明的那样。

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