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霍乱弧菌ApbE的动力学特征:底物特异性和调控机制。

Kinetic characterization of Vibrio cholerae ApbE: Substrate specificity and regulatory mechanisms.

作者信息

Fang Xuan, Liang Pingdong, Raba Daniel Alexander, Rosas-Lemus Mónica, Chakravarthy Srinivas, Tuz Karina, Juárez Oscar

机构信息

Department of Biological Sciences, Illinois Institute of Technology, Chicago, Illinois, United States of America.

Biophysics Collaborative Access Team, Advanced Photon Source, Argonne National Laboratory, Lemont, Illinois, United States of America.

出版信息

PLoS One. 2017 Oct 24;12(10):e0186805. doi: 10.1371/journal.pone.0186805. eCollection 2017.

Abstract

ApbE is a member of a novel family of flavin transferases that incorporates flavin mononucleotide (FMN) to subunits of diverse respiratory complexes, which fulfill important homeostatic functions. In this work a detailed characterization of Vibrio cholerae ApbE physiologic activity, substrate specificity and pH dependency was carried out. The data obtained show novel characteristics of the regulation and function of this family. For instance, our experiments indicate that divalent cations are essential for ApbE function, and that the selectivity depends largely on size and the coordination sphere of the cation. Our data also show that ApbE regulation by pH, ADP and potassium is an important mechanism that enhances the adaptation, survival and colonization of V. cholerae in the small intestine. Moreover, studies of the pH-dependency of the activity show that the reaction is favored under alkaline conditions, with a pKa of 8.4. These studies, together with sequence and structure analysis allowed us to identify His257, which is absolutely conserved in the family, as a candidate for the residue whose deprotonation controls the activity. Remarkably, the mutant H257G abolished the flavin transfer activity, strongly indicating that this residue plays an important role in the catalytic mechanism of ApbE.

摘要

ApbE是一个新型黄素转移酶家族的成员,该家族将黄素单核苷酸(FMN)整合到多种呼吸复合体的亚基中,这些复合体具有重要的稳态功能。在这项工作中,对霍乱弧菌ApbE的生理活性、底物特异性和pH依赖性进行了详细表征。获得的数据显示了该家族调控和功能的新特性。例如,我们的实验表明二价阳离子对ApbE功能至关重要,且选择性很大程度上取决于阳离子的大小和配位球。我们的数据还表明,pH、ADP和钾对ApbE的调控是增强霍乱弧菌在小肠中适应性、生存和定殖的重要机制。此外,对活性pH依赖性的研究表明,该反应在碱性条件下更有利,pKa为8.4。这些研究,连同序列和结构分析,使我们能够确定在该家族中绝对保守的His257,作为其去质子化控制活性的候选残基。值得注意的是,突变体H257G消除了黄素转移活性,强烈表明该残基在ApbE的催化机制中起重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/82a3/5655446/5bbdf5773a35/pone.0186805.g001.jpg

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