• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于遗传分析和基于主体的模拟的肋骨近端-远端模式形成的最小充分模型。

A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulations.

机构信息

Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Research, University of Southern California, Los Angeles, United States.

Lakeland Applied Sciences LLC, Altadena, United States.

出版信息

Elife. 2017 Oct 25;6:e29144. doi: 10.7554/eLife.29144.

DOI:10.7554/eLife.29144
PMID:29068314
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5693115/
Abstract

For decades, the mechanism of skeletal patterning along a proximal-distal axis has been an area of intense inquiry. Here, we examine the development of the ribs, simple structures that in most terrestrial vertebrates consist of two skeletal elements-a proximal bone and a distal cartilage portion. While the ribs have been shown to arise from the somites, little is known about how the two segments are specified. During our examination of genetically modified mice, we discovered a series of progressively worsening phenotypes that could not be easily explained. Here, we combine genetic analysis of rib development with agent-based simulations to conclude that proximal-distal patterning and outgrowth could occur based on simple rules. In our model, specification occurs during somite stages due to varying Hedgehog protein levels, while later expansion refines the pattern. This framework is broadly applicable for understanding the mechanisms of skeletal patterning along a proximal-distal axis.

摘要

几十年来,沿着近-远轴的骨骼模式形成的机制一直是一个研究热点。在这里,我们研究了肋骨的发育,肋骨是一种简单的结构,在大多数陆地脊椎动物中由两个骨骼元素组成-一个近端骨骼和一个远端软骨部分。虽然肋骨已经被证明是从体节中产生的,但对于如何指定这两个部分知之甚少。在对基因修饰小鼠的研究中,我们发现了一系列逐渐恶化的表型,这些表型很难用简单的解释来解释。在这里,我们结合肋骨发育的遗传分析和基于主体的模拟,得出结论,近-远模式形成和生长可以基于简单的规则发生。在我们的模型中,由于 Hedgehog 蛋白水平的变化,在体节阶段就发生了指定,而后期的扩展则细化了模式。这个框架广泛适用于理解沿近-远轴的骨骼模式形成的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/26ac28b4b4d6/elife-29144-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/5eaefd16557c/elife-29144-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/4b7f48ffa0a5/elife-29144-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/7d6e75776560/elife-29144-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/b5dc3524d608/elife-29144-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/0879a7f0a9c8/elife-29144-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/8b5dbb4f5ea1/elife-29144-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/06580ebef37f/elife-29144-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/6761339e7c2a/elife-29144-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/aadc8c725d49/elife-29144-fig6-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/f793196876b2/elife-29144-fig6-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/1d411cca9b7b/elife-29144-fig6-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/26ac28b4b4d6/elife-29144-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/5eaefd16557c/elife-29144-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/4b7f48ffa0a5/elife-29144-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/7d6e75776560/elife-29144-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/b5dc3524d608/elife-29144-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/0879a7f0a9c8/elife-29144-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/8b5dbb4f5ea1/elife-29144-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/06580ebef37f/elife-29144-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/6761339e7c2a/elife-29144-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/aadc8c725d49/elife-29144-fig6-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/f793196876b2/elife-29144-fig6-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/1d411cca9b7b/elife-29144-fig6-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2af/5693115/26ac28b4b4d6/elife-29144-fig7.jpg

相似文献

1
A minimally sufficient model for rib proximal-distal patterning based on genetic analysis and agent-based simulations.基于遗传分析和基于主体的模拟的肋骨近端-远端模式形成的最小充分模型。
Elife. 2017 Oct 25;6:e29144. doi: 10.7554/eLife.29144.
2
Role of somite patterning in the formation of Weberian apparatus and pleural rib in zebrafish.体节模式在韦伯氏器和斑马鱼肋的形成中的作用。
J Anat. 2020 Apr;236(4):622-629. doi: 10.1111/joa.13135. Epub 2019 Dec 15.
3
Contribution of somitic cells to the avian ribs.体节细胞对鸟类肋骨的贡献。
Dev Biol. 2003 Apr 1;256(1):114-26. doi: 10.1016/s0012-1606(02)00117-3.
4
Hoxa-5 acts in segmented somites to regulate cervical vertebral morphology.Hoxa-5 在分段的体节中起作用,调节颈椎的形态。
Mech Dev. 2013 Apr-May;130(4-5):226-40. doi: 10.1016/j.mod.2013.02.002. Epub 2013 Feb 24.
5
Defective somite patterning in mouse embryos with reduced levels of Tbx6.Tbx6水平降低的小鼠胚胎中体节模式形成缺陷。
Development. 2003 Apr;130(8):1681-90. doi: 10.1242/dev.00367.
6
Hox patterning of the vertebrate rib cage.脊椎动物胸腔的Hox基因模式形成
Development. 2007 Aug;134(16):2981-9. doi: 10.1242/dev.007567. Epub 2007 Jul 11.
7
Inductive signals from the somatopleure mediated by bone morphogenetic proteins are essential for the formation of the sternal component of avian ribs.由骨形态发生蛋白介导的来自体壁层的诱导信号对于鸟类肋骨胸骨成分的形成至关重要。
Dev Biol. 2001 Apr 15;232(2):284-300. doi: 10.1006/dbio.2001.0198.
8
The paired homeobox gene Uncx4.1 specifies pedicles, transverse processes and proximal ribs of the vertebral column.配对的同源盒基因Uncx4.1决定了脊柱的椎弓根、横突和近端肋骨。
Development. 2000 Jun;127(11):2259-67. doi: 10.1242/dev.127.11.2259.
9
Ventral axial organs regulate expression of myotomal Fgf-8 that influences rib development.腹侧轴器官调节肌节Fgf-8的表达,而Fgf-8会影响肋骨发育。
Dev Biol. 2003 Mar 1;255(1):30-47. doi: 10.1016/s0012-1606(02)00051-9.
10
Mathematical models for somite formation.体节形成的数学模型。
Curr Top Dev Biol. 2008;81:183-203. doi: 10.1016/S0070-2153(07)81006-4.

引用本文的文献

1
Recapitulation of endochondral ossification by hPSC-derived SOX9 sclerotomal progenitors.人多能干细胞来源的SOX9 硬骨节祖细胞对软骨内成骨的重现
Nat Commun. 2025 Mar 21;16(1):2781. doi: 10.1038/s41467-025-58122-9.
2
A Spatio-Temporal-Dependent Requirement of Sonic Hedgehog in the Early Development of Sclerotome-Derived Vertebrae and Ribs.时空依赖的 Sonic Hedgehog 在软骨内成骨来源的椎骨和肋骨早期发育中的需求。
Int J Mol Sci. 2024 May 21;25(11):5602. doi: 10.3390/ijms25115602.
3
Advancements in Genetic Marker Exploration for Livestock Vertebral Traits with a Focus on China.

本文引用的文献

1
Stan: A Probabilistic Programming Language.斯坦:一种概率编程语言。
J Stat Softw. 2017;76. doi: 10.18637/jss.v076.i01. Epub 2017 Jan 11.
2
John Saunders' ZPA, Sonic hedgehog and digit identity - How does it really all work?约翰·桑德斯的极化活性区、音猬因子与指(趾)身份——这一切究竟是如何运作的?
Dev Biol. 2017 Sep 15;429(2):391-400. doi: 10.1016/j.ydbio.2017.02.001. Epub 2017 Feb 2.
3
Agent-based modelling in synthetic biology.合成生物学中基于主体的建模
以中国为重点的家畜脊椎性状遗传标记探索进展
Animals (Basel). 2024 Feb 11;14(4):594. doi: 10.3390/ani14040594.
4
A murine model of large-scale bone regeneration reveals a selective requirement for Sonic Hedgehog.大规模骨再生的小鼠模型揭示了对音猬因子的选择性需求。
NPJ Regen Med. 2022 May 17;7(1):30. doi: 10.1038/s41536-022-00225-8.
5
CNPY4 inhibits the Hedgehog pathway by modulating membrane sterol lipids.CNPY4 通过调节膜固醇脂质抑制 Hedgehog 通路。
Nat Commun. 2022 May 3;13(1):2407. doi: 10.1038/s41467-022-30186-x.
6
Double-layered two-directional somatopleural cell migration during chicken body wall development revealed with local fluorescent tissue labeling.双层双向体壁细胞迁移在鸡体壁发育过程中被局部荧光组织标记揭示。
Anat Sci Int. 2022 Sep;97(4):380-390. doi: 10.1007/s12565-022-00652-z. Epub 2022 Feb 20.
7
Agent-based modeling of morphogenetic systems: Advantages and challenges.基于主体的形态发生系统建模:优势与挑战。
PLoS Comput Biol. 2019 Mar 28;15(3):e1006577. doi: 10.1371/journal.pcbi.1006577. eCollection 2019 Mar.
Essays Biochem. 2016 Nov 30;60(4):325-336. doi: 10.1042/EBC20160037.
4
Morphogen rules: design principles of gradient-mediated embryo patterning.形态发生素规则:梯度介导的胚胎模式形成的设计原则
Development. 2015 Dec 1;142(23):3996-4009. doi: 10.1242/dev.129452.
5
Modelling stripe formation in zebrafish: an agent-based approach.斑马鱼条纹形成的建模:一种基于主体的方法。
J R Soc Interface. 2015 Nov 6;12(112). doi: 10.1098/rsif.2015.0812.
6
Anisotropic stress orients remodelling of mammalian limb bud ectoderm.各向异性应力引导哺乳动物肢芽外胚层的重塑。
Nat Cell Biol. 2015 May;17(5):569-79. doi: 10.1038/ncb3156. Epub 2015 Apr 20.
7
Ptch1 and Gli regulate Shh signalling dynamics via multiple mechanisms.Ptch1和Gli通过多种机制调节Shh信号传导动力学。
Nat Commun. 2015 Apr 2;6:6709. doi: 10.1038/ncomms7709.
8
Mechanisms of retinoic acid signalling and its roles in organ and limb development.视黄酸信号转导的机制及其在器官和肢体发育中的作用。
Nat Rev Mol Cell Biol. 2015 Feb;16(2):110-23. doi: 10.1038/nrm3932. Epub 2015 Jan 5.
9
Regulatory modulation of the T-box gene Tbx5 links development, evolution, and adaptation of the sternum.T盒基因Tbx5的调控调节与胸骨的发育、进化及适应性相关联。
Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):17917-22. doi: 10.1073/pnas.1409913111. Epub 2014 Dec 2.
10
TGFβ signaling in cartilage development and maintenance.转化生长因子β信号通路在软骨发育与维持中的作用
Birth Defects Res C Embryo Today. 2014 Mar;102(1):37-51. doi: 10.1002/bdrc.21058.