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药用植物DNA标记辅助育种(Ⅱ)紫苏新品种高产SNPs辅助鉴定与育种研究

[Medicinal plant DNA marker assisted breeding (Ⅱ) the assistant identification of SNPs assisted identification and breeding research of high yield Perilla frutescens new variety].

作者信息

Shen Qi, Zhang Dong, Sun Wei, Zhang Yu-Jun, Shang Zhi-Wei, Chen Shi-Lin

机构信息

Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing 100700, China.

Rapeseed reaearch institute, Guizhou Academy of Agricultural Sciences, Guiyang 550008, China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2017 May;42(9):1668-1672. doi: 10.19540/j.cnki.cjcmm.20170418.001.

DOI:10.19540/j.cnki.cjcmm.20170418.001
PMID:29082687
Abstract

Perilla frutescens is one of 60 kinds of food and medicine plants in the initial directory announced by health ministry of China. With the development of Perilla domain in recent , the breeding and application of good varieties has become the main bottleneck of its development. This study reported that applied to the system selection, add to marker-assisted method to breed perilla varieties. Through the whole genome sequencing and consistency matching, annotated the mutation locus according to genome data, and comparison analysis with Perilla common variants database, finally selected 30 non-synonymous mutation SNPs used as characteristic markers of Zhongyan Feishu No.1. those SNP marker were used as chosen standard of Perilla varieties. Finally breeding new perilla variety Zhongyan Feishu No.1, which possess to characters of the leaf and seed dual-used, high yield, high resistance, and could used to green fertilizer. The Zhongyan Feishu No.1 acquired the plant new varieties identification of Beijing city , the identification numbers is 2016054. Marker assisted identification guide new varieties breeding in plants, which can provide a new reference for breeding of medicinal plants.

摘要

紫苏是中国卫生部公布的首批60种药食两用植物之一。近年来随着紫苏领域的发展,优良品种的选育与应用已成为其发展的主要瓶颈。本研究报道了应用系统选育,并加入分子标记辅助方法来培育紫苏品种。通过全基因组测序与一致性比对,根据基因组数据注释突变位点,并与紫苏常见变异数据库进行比较分析,最终筛选出30个非同义突变的单核苷酸多态性位点(SNPs)作为中研飞苏1号的特征性标记。这些SNP标记作为紫苏品种的筛选标准。最终培育出了新紫苏品种中研飞苏1号,其具有叶籽两用、高产、高抗且可作绿肥的特点。中研飞苏1号获得了北京市植物新品种权证书,品种权号为2016054。分子标记辅助鉴定指导植物新品种选育,可为药用植物育种提供新的参考。

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Global Pharmacopoeia Genome Database is an integrated and mineable genomic database for traditional medicines derived from eight international pharmacopoeias.
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