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通过环境与宿主接触进行病原体传播:基于主体的排队论框架

Pathogen transfer through environment-host contact: an agent-based queueing theoretic framework.

作者信息

Chen Shi, Lenhart Suzanne, Day Judy D, Lee Chihoon, Dulin Michael, Lanzas Cristina

机构信息

Department of Public Health Sciences, University of North Carolina Charlotte, Charlotte, NC, USA.

Department of Population Health and Pathobiology, North Carolina State University, Raleigh, NC, USA.

出版信息

Math Med Biol. 2018 Sep 11;35(3):409-425. doi: 10.1093/imammb/dqx014.

Abstract

Queueing theory studies the properties of waiting queues and has been applied to investigate direct host-to-host transmitted disease dynamics, but its potential in modelling environmentally transmitted pathogens has not been fully explored. In this study, we provide a flexible and customizable queueing theory modelling framework with three major subroutines to study the in-hospital contact processes between environments and hosts and potential nosocomial pathogen transfer, where environments are servers and hosts are customers. Two types of servers with different parameters but the same utilization are investigated. We consider various forms of transfer functions that map contact duration to the amount of pathogen transfer based on existing literature. We propose a case study of simulated in-hospital contact processes and apply stochastic queues to analyse the amount of pathogen transfer under different transfer functions, and assume that pathogen amount decreases during the inter-arrival time. Different host behaviour (feedback and non-feedback) as well as initial pathogen distribution (whether in environment and/or in hosts) are also considered and simulated. We assess pathogen transfer and circulation under these various conditions and highlight the importance of the nonlinear interactions among contact processes, transfer functions and pathogen demography during the contact process. Our modelling framework can be readily extended to more complicated queueing networks to simulate more realistic situations by adjusting parameters such as the number and type of servers and customers, and adding extra subroutines.

摘要

排队论研究等待队列的性质,并已被应用于研究直接宿主到宿主传播的疾病动态,但它在模拟环境传播病原体方面的潜力尚未得到充分探索。在本研究中,我们提供了一个灵活且可定制的排队论建模框架,该框架有三个主要子例程,用于研究环境与宿主之间的院内接触过程以及潜在的医院病原体传播,其中环境是服务器,宿主是客户。研究了两种具有不同参数但相同利用率的服务器类型。基于现有文献,我们考虑了将接触持续时间映射到病原体传播量的各种形式的传递函数。我们提出了一个模拟院内接触过程的案例研究,并应用随机队列来分析不同传递函数下的病原体传播量,并假设在到达间隔时间内病原体数量会减少。还考虑并模拟了不同的宿主行为(反馈和非反馈)以及初始病原体分布(是否在环境中和/或在宿主中)。我们评估了在这些各种条件下的病原体传播和循环,并强调了接触过程中接触过程、传递函数和病原体人口统计学之间非线性相互作用的重要性。我们的建模框架可以很容易地扩展到更复杂的排队网络,通过调整服务器和客户的数量和类型等参数,并添加额外的子例程来模拟更现实的情况。

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