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肾移植中的基因组学概念

Concepts of Genomics in Kidney Transplantation.

作者信息

Oetting William S, Dorr Casey, Remmel Rory P, Matas Arthur J, Israni Ajay K, Jacobson Pamala A

机构信息

Department of Experimental and Clinical Pharmacology, University of Minnesota, Minneapolis, MN.

Minneapolis Medical Research Foundation, Minneapolis, MN.

出版信息

Curr Transplant Rep. 2017 Jun;4(2):116-123. doi: 10.1007/s40472-017-0153-x. Epub 2017 May 24.

DOI:10.1007/s40472-017-0153-x
PMID:29123971
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5673265/
Abstract

PURPOSE OF REVIEW

Identification of genetic variants to aid in individualized treatment of solid organ allograft recipients would improve graft survival. We will review the current state of knowledge for associations of variants with transplant outcomes.

RECENT FINDINGS

Many studies have yet to exhibit robust and reproducible results, however, pharmacogenomic studies focusing on cytochrome P450 (CYP) enzymes, transporters and HLA variants have shown strong associations with outcomes and have relevance towards drugs used in transplant. Genome wide association study data for the immunosuppressant tacrolimus have identified multiple variants in the gene associated with trough concentrations. Additionally, variants had been shown to confer risk to the development of end stage renal disease in African Americans.

SUMMARY

The field is rapidly evolving and new technology such as next generation sequencing, along with larger cohorts, will soon be commonly applied in transplantation to understand genetic association with outcomes and personalized medicine.

摘要

综述目的

识别基因变异以辅助实体器官移植受者的个体化治疗,将改善移植物存活。我们将综述当前关于变异与移植结局关联的知识状态。

最新发现

许多研究尚未展现出稳健且可重复的结果,然而,聚焦于细胞色素P450(CYP)酶、转运体和HLA变异的药物基因组学研究已显示出与结局有强关联,且与移植中使用的药物相关。免疫抑制剂他克莫司的全基因组关联研究数据已在与谷浓度相关的基因中识别出多个变异。此外,这些变异已被证明会使非裔美国人患终末期肾病的风险增加。

总结

该领域正在迅速发展,诸如新一代测序等新技术,连同更大的队列,将很快普遍应用于移植领域,以了解基因与结局的关联以及个性化医疗。

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2
The Pharmacogenetics of Tacrolimus in Corticosteroid-Sparse Pediatric and Adult Kidney Transplant Recipients.糖皮质激素用量少的儿童及成人肾移植受者中他克莫司的药物遗传学
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CYP3A5 polymorphisms and their effects on tacrolimus exposure in an ethnically diverse South African renal transplant population.CYP3A5 多态性及其对南非不同种族肾移植人群中他克莫司暴露的影响。
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Effect of CYP3A and ABCB1 single nucleotide polymorphisms on the pharmacokinetics and pharmacodynamics of calcineurin inhibitors: Part II.CYP3A 和 ABCB1 单核苷酸多态性对钙调神经磷酸酶抑制剂的药代动力学和药效学的影响:第二部分。
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The role of pharmacogenetics in the disposition of and response to tacrolimus in solid organ transplantation.药物遗传学在实体器官移植中他克莫司的处置及反应中的作用。
Clin Pharmacokinet. 2014 Feb;53(2):123-39. doi: 10.1007/s40262-013-0120-3.
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The POR rs1057868-rs2868177 GC-GT diplotype is associated with high tacrolimus concentrations in early post-renal transplant recipients.POR基因rs1057868-rs2868177位点的GC-GT双倍型与肾移植术后早期受者较高的他克莫司血药浓度相关。
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Molecular Markers of Kidney Transplantation Outcome: Current Omics Tools and Future Developments.肾移植结局的分子标志物:当前组学工具和未来发展。
Int J Mol Sci. 2022 Jun 5;23(11):6318. doi: 10.3390/ijms23116318.
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Genetic Variants Associated With Immunosuppressant Pharmacokinetics and Adverse Effects in the DeKAF Genomics Genome-wide Association Studies.与免疫抑制剂药代动力学和不良反应相关的遗传变异在 DeKAF 基因组全基因组关联研究中的分析。
Transplantation. 2019 Jun;103(6):1131-1139. doi: 10.1097/TP.0000000000002625.

本文引用的文献

1
Telomere Length Assessment for Prediction of Organ Transplantation Outcome. Future or Failure: A Review of the Literature.用于预测器官移植结果的端粒长度评估。未来还是失败:文献综述
Med Sci Monit. 2017 Jan 11;23:158-162. doi: 10.12659/msm.899490.
2
HLA Mismatching Strategies for Solid Organ Transplantation - A Balancing Act.实体器官移植中的HLA配型策略——一种平衡行为
Front Immunol. 2016 Dec 7;7:575. doi: 10.3389/fimmu.2016.00575. eCollection 2016.
3
Clinical Pharmacogenetics Implementation Consortium (CPIC) Guidelines for CYP2C19 and Voriconazole Therapy.临床药物遗传学实施联盟(CPIC) CYP2C19 和伏立康唑治疗指南。
Clin Pharmacol Ther. 2017 Jul;102(1):45-51. doi: 10.1002/cpt.583. Epub 2017 Apr 18.
4
Outcome disparities between African Americans and Caucasians in contemporary kidney transplant recipients.当代肾移植受者中非洲裔美国人和白种人之间的结局差异。
Am J Surg. 2017 Apr;213(4):666-672. doi: 10.1016/j.amjsurg.2016.11.024. Epub 2016 Nov 18.
5
BICD1 and Chromosome 18 Polymorphisms Associated With Recipients' Telomere Length Affect Kidney Allograft Function After Transplantation.与受体端粒长度相关的BICD1和18号染色体多态性影响移植后肾移植功能。
Transplant Proc. 2016 Jun;48(5):1451-5. doi: 10.1016/j.transproceed.2015.10.086.
6
Single Nucleotide Polymorphisms and Long-Term Clinical Outcome in Renal Transplant Patients: A Validation Study.肾移植患者的单核苷酸多态性与长期临床结局:一项验证性研究
Am J Transplant. 2017 Feb;17(2):528-533. doi: 10.1111/ajt.13995. Epub 2016 Sep 19.
7
Impact of Cardiovascular Risk Factors on Graft Outcome Disparities in Black Kidney Transplant Recipients.心血管危险因素对黑人肾移植受者移植物结局差异的影响。
Hypertension. 2016 Sep;68(3):715-25. doi: 10.1161/HYPERTENSIONAHA.116.07775. Epub 2016 Jul 11.
8
Genome-Wide Association Study of Acute Renal Graft Rejection.急性肾移植排斥反应的全基因组关联研究
Am J Transplant. 2017 Jan;17(1):201-209. doi: 10.1111/ajt.13912. Epub 2016 Jul 22.
9
Deceased-Donor Apolipoprotein L1 Renal-Risk Variants Have Minimal Effects on Liver Transplant Outcomes.已故供体载脂蛋白L1肾脏风险变体对肝移植结果影响极小。
PLoS One. 2016 Apr 7;11(4):e0152775. doi: 10.1371/journal.pone.0152775. eCollection 2016.
10
Analysis of single nucleotide polymorphisms implicate mTOR signalling in the development of new-onset diabetes after transplantation.单核苷酸多态性分析表明,mTOR信号传导与移植后新发糖尿病的发生有关。
BBA Clin. 2016 Jan 8;5:41-5. doi: 10.1016/j.bbacli.2015.12.004. eCollection 2016 Jun.