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“新几内亚植原体(暂定种)”,一种与新几内亚岛上博吉亚椰子综合征和香蕉枯萎病相关的新分类单元。

'Candidatus Phytoplasma noviguineense', a novel taxon associated with Bogia coconut syndrome and banana wilt disease on the island of New Guinea.

作者信息

Miyazaki Akio, Shigaki Toshiro, Koinuma Hiroaki, Iwabuchi Nozomu, Rauka Gou Bue, Kembu Alfred, Saul Josephine, Watanabe Kiyoto, Nijo Takamichi, Maejima Kensaku, Yamaji Yasuyuki, Namba Shigetou

机构信息

Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

National Agricultural Research Institute, PO Box 1639, Lae, Morobe Province 411, Papua New Guinea.

出版信息

Int J Syst Evol Microbiol. 2018 Jan;68(1):170-175. doi: 10.1099/ijsem.0.002480. Epub 2017 Nov 14.

Abstract

Bogia coconut syndrome (BCS) is one of the lethal yellowing (LY)-type diseases associated with phytoplasma presence that are seriously threatening coconut cultivation worldwide. It has recently emerged, and is rapidly spreading in northern parts of the island of New Guinea. BCS-associated phytoplasmas collected in different regions were compared in terms of 16S rRNA gene sequences, revealing high identity among them represented by strain BCS-Bo. Comparative analysis of the 16S rRNA gene sequences revealed that BCS-Bo shared less than a 97.5 % similarity with other species of 'Candidatus Phytoplasma', with a maximum value of 96.08 % (with strain LY; GenBank accession no. U18747). This result indicates the necessity and propriety of a novel taxon for BCS phytoplasmas according to the recommendations of the IRPCM. Phylogenetic analysis was also conducted on 16S rRNA gene sequences, resulting in a monophyletic cluster composed of BCS-Bo and other LY-associated phytoplasmas. Other phytoplasmas on the island of New Guinea associated with banana wilt and arecanut yellow leaf diseases showed high similarities to BCS-Bo and were closely related to BCS phytoplasmas. Based on the uniqueness of their 16S rRNA gene sequences, a novel taxon 'Ca.Phytoplasma noviguineense' is proposed for these phytoplasmas found on the island of New Guinea, with strain BCS-Bo (GenBank accession no. LC228755) as the reference strain. The novel taxon is described in detail, including information on the symptoms of associated diseases and additional genetic features of the secY gene and rp operon.

摘要

博贾椰子综合征(BCS)是与植原体存在相关的致死性黄化(LY)类型疾病之一,严重威胁着全球椰子种植。它最近出现,并在新几内亚岛北部迅速蔓延。对不同地区收集的与BCS相关的植原体进行了16S rRNA基因序列比较,结果显示它们之间具有高度同源性,以菌株BCS-Bo为代表。16S rRNA基因序列的比较分析表明,BCS-Bo与“Ca.植原体属”的其他物种相似度低于97.5%,最高值为96.08%(与菌株LY;GenBank登录号U18747相比)。这一结果表明,根据国际植物病原体分类委员会(IRPCM)的建议,为BCS植原体设立一个新分类单元是必要且合适的。还对16S rRNA基因序列进行了系统发育分析,结果形成了一个由BCS-Bo和其他与LY相关的植原体组成的单系聚类。新几内亚岛上与香蕉枯萎病和槟榔黄叶病相关的其他植原体与BCS-Bo表现出高度相似性,且与BCS植原体密切相关。基于其16S rRNA基因序列的独特性,为在新几内亚岛发现的这些植原体提出了一个新分类单元“Ca.植原体新几内亚种”,以菌株BCS-Bo(GenBank登录号LC228755)作为参考菌株。详细描述了这个新分类单元,包括相关疾病症状的信息以及secY基因和rp操纵子的其他遗传特征。

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