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遗传性癌症基因检测板对临床护理的影响及经验教训。

The impact of hereditary cancer gene panels on clinical care and lessons learned.

作者信息

Okur Volkan, Chung Wendy K

机构信息

Division of Molecular Genetics, Department of Pediatrics, Columbia University Medical Center, New York, New York 10032, USA.

Division of Molecular Genetics, Department of Pediatrics, Columbia University Medical Center, New York, New York 10032, USA;

出版信息

Cold Spring Harb Mol Case Stud. 2017 Nov 21;3(6). doi: 10.1101/mcs.a002154. Print 2017 Nov.

Abstract

Mutations in hereditary cancer syndromes account for a modest fraction of all cancers; however, identifying patients with these germline mutations offers tremendous health benefits to both patients and their family members. There are about 60 genes that confer a high lifetime risk of specific cancers, and this information can be used to tailor prevention, surveillance, and treatment. With advances in next-generation sequencing technologies and the elimination of gene patents for evaluating genetic information, we are now able to analyze multiple genes simultaneously, leading to the widespread clinical use of gene panels for germline cancer testing. Over the last 4 years since these panels were introduced, we have learned about the diagnostic yield of testing, the expanded phenotypes of the patients with mutations, and the clinical utility of genetic testing in patients with cancer and/or without cancer but with a family history of cancer. We have also experienced challenges including the large number of variants of unknown significance (VUSs), identification of somatic mutations and need to differentiate these from germline mutations, technical issues with particular genes and mutations, insurance coverage and reimbursement issues, lack of access to data, and lack of clinical management guidelines for newer and, especially, moderate and low-penetrance genes. The lessons learned from cancer genetic testing panels are applicable to other clinical areas as well and highlight the problems to be solved as we advance genomic medicine.

摘要

遗传性癌症综合征中的突变在所有癌症中所占比例较小;然而,识别携带这些种系突变的患者对患者及其家庭成员都有巨大的健康益处。大约有60个基因会使个体在一生中患特定癌症的风险升高,这些信息可用于制定预防、监测和治疗方案。随着下一代测序技术的进步以及评估遗传信息的基因专利的取消,我们现在能够同时分析多个基因,从而使基因检测板在种系癌症检测中得到广泛临床应用。自这些检测板问世后的过去4年里,我们了解了检测的诊断率、携带突变患者的扩展表型以及基因检测在癌症患者和/或无癌症但有癌症家族史患者中的临床效用。我们也遇到了一些挑战,包括大量意义未明的变异(VUS)、体细胞突变的识别以及将其与种系突变区分开来的需求、特定基因和突变的技术问题、保险覆盖和报销问题、数据获取困难以及缺乏针对新出现的,尤其是中度和低度 penetrance 基因的临床管理指南。从癌症基因检测板中吸取的经验教训也适用于其他临床领域,并凸显了我们在推进基因组医学过程中需要解决的问题。

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