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Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression.土壤热量对根际微生物群落重新组装及植物病害抑制的影响
Ecol Lett. 2016 Apr;19(4):375-82. doi: 10.1111/ele.12567. Epub 2016 Feb 1.
2
Seasonal effect and anthropogenic impact on the composition of the active bacterial community in Mediterranean orchard soil.季节性效应和人为影响对地中海果园土壤中活性细菌群落组成的作用
FEMS Microbiol Ecol. 2015 Sep;91(9):fiv096. doi: 10.1093/femsec/fiv096. Epub 2015 Aug 6.
3
Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.解析聚合酶链反应:理解并纠正与引物简并性和引物-模板错配相关的偏差。
PLoS One. 2015 May 21;10(5):e0128122. doi: 10.1371/journal.pone.0128122. eCollection 2015.
4
Climate change and impacts in the Eastern Mediterranean and the Middle East.地中海东部和中东地区的气候变化及其影响。
Clim Change. 2012;114(3-4):667-687. doi: 10.1007/s10584-012-0418-4. Epub 2012 Mar 7.
5
Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession.解析介导微生物演替中随机过程与确定性过程平衡的机制。
Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):E1326-32. doi: 10.1073/pnas.1414261112. Epub 2015 Mar 2.
6
Changing precipitation pattern alters soil microbial community response to wet-up under a Mediterranean-type climate.降水模式的改变会改变地中海型气候下土壤微生物群落对湿润的响应。
ISME J. 2015 Mar 17;9(4):946-57. doi: 10.1038/ismej.2014.192.
7
Biodiversity acts as insurance of productivity of bacterial communities under abiotic perturbations.生物多样性是细菌群落应对非生物胁迫下生产力的保障。
ISME J. 2014 Dec;8(12):2445-52. doi: 10.1038/ismej.2014.91. Epub 2014 Jun 13.
8
Resilience of soil bacterial community to irrigation with water of different qualities under Mediterranean climate.在地中海气候下,不同水质灌溉对土壤细菌群落的恢复力。
Environ Microbiol. 2014 Feb;16(2):559-69. doi: 10.1111/1462-2920.12183. Epub 2013 Jul 4.
9
Changes in assembly processes in soil bacterial communities following a wildfire disturbance.土壤细菌群落组装过程在野火干扰后的变化。
ISME J. 2013 Jun;7(6):1102-11. doi: 10.1038/ismej.2013.11. Epub 2013 Feb 14.
10
Biodiversity and ecosystem stability: a synthesis of underlying mechanisms.生物多样性和生态系统稳定性:潜在机制的综合分析。
Ecol Lett. 2013 May;16 Suppl 1:106-15. doi: 10.1111/ele.12073. Epub 2013 Jan 24.

灌溉水水质影响受热干扰后土壤功能和细菌群落稳定性。

Quality of Irrigation Water Affects Soil Functionality and Bacterial Community Stability in Response to Heat Disturbance.

机构信息

Department of Soil, Water, and Environmental Sciences, Agricultural Research Organization, Volcani Center, Beit Dagan, Israel.

Department of Plant Pathology and Microbiology, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel.

出版信息

Appl Environ Microbiol. 2018 Jan 31;84(4). doi: 10.1128/AEM.02087-17. Print 2018 Feb 15.

DOI:10.1128/AEM.02087-17
PMID:29180372
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5795067/
Abstract

Anthropogenic activities alter the structure and function of a bacterial community. Furthermore, bacterial communities structured by the conditions the anthropogenic activities present may consequently reduce their stability in response to an unpredicted acute disturbance. The present mesocosm-scale study exposed soil bacterial communities to different irrigation water types, including freshwater, fertilized freshwater, treated wastewater, and artificial wastewater, and evaluated their response to a disturbance caused by heat. These effectors may be considered deterministic and stochastic forces common in agricultural operations of arid and semiarid regions. Bacterial communities under conditions of high mineral and organic carbon availability (artificial wastewater) differed from the native bacterial community and showed a proteobacterial dominance. These bacterial communities had a lower resistance to the heat treatment disturbance than soils under conditions of low resource availability (high-quality treated wastewater or freshwater). The latter soil bacterial communities showed a higher abundance of operational taxonomic units (OTUs) classified as These results were elucidated by soil under conditions of high resource availability, which lost higher degrees of functional potential and had a greater bacterial community composition change. However, the functional resilience, after the disturbance ended, was higher under a condition of high resource availability despite the bacterial community composition shift and the decrease in species richness. The functional resilience was directly connected to the high growth rates of certain and proteobacterial groups. A high stability was found in samples that supported the coexistence of both resistant OTUs and fast-growing OTUs. This report presents the results of a study employing a hypothesis-based experimental approach to reveal the forces involved in determining the stability of a soil bacterial community to disturbance. The resultant postdisturbance bacterial community composition dynamics and functionality were analyzed. The paper demonstrates the relatedness of community structure and stability under cultivation conditions prevalent in an arid area under irrigation with water of different qualities. The use of common agricultural practices to demonstrate these features has not been described before. The combination of a fundamental theoretical issue in ecology with common and concerning disturbances caused by agricultural practice makes this study unique. Furthermore, the results of the present study have applicable importance regarding soil conservation, as it enables a better characterization and monitoring of stressed soil bacterial communities and possible intervention to reduce the stress. It will also be of valued interest in coming years, as fresh water scarcity and the use of alternative water sources are expected to rise globally.

摘要

人为活动改变了细菌群落的结构和功能。此外,由人为活动条件构建的细菌群落可能会降低其对意外急性干扰的稳定性。本中观尺度研究将土壤细菌群落暴露于不同的灌溉水类型,包括淡水、施肥淡水、处理废水和人工废水,并评估了它们对热引起的干扰的反应。这些效应物可被视为干旱和半干旱地区农业操作中常见的确定性和随机性因素。在高矿物质和有机碳可利用性条件下(人工废水)的细菌群落与本地细菌群落不同,表现出变形菌的优势。这些细菌群落对热处理干扰的抵抗力低于资源可用性低的土壤(高质量处理废水或淡水)。后一种土壤细菌群落显示出更高丰度的操作分类单元(OTU)被分类为 这些结果是由高资源可用性条件下的土壤揭示的,该土壤失去了更高程度的功能潜力,并且细菌群落组成发生了更大的变化。然而,尽管细菌群落组成发生了变化,物种丰富度下降,但在高资源可用性条件下,功能恢复力更高。功能恢复力与某些 和变形菌的高生长速率直接相关。在支持抗性 OTU 和快速生长 OTU 共存的样本中发现了高稳定性。本报告介绍了一项基于假设的实验方法研究的结果,该方法揭示了决定土壤细菌群落对干扰稳定性的相关因素。分析了干扰后的细菌群落组成动态和功能。本文展示了在灌溉条件下与干旱地区普遍存在的培养条件下的群落结构和稳定性之间的相关性。以前没有描述过使用常见的农业实践来展示这些特征。将生态学中的一个基本理论问题与农业实践引起的常见和相关干扰相结合,使这项研究具有独特性。此外,本研究的结果对于土壤保护具有实际意义,因为它能够更好地描述和监测受到压力的土壤细菌群落,并可能进行干预以减轻压力。在未来几年,它也将具有重要意义,因为预计全球淡水短缺和替代水源的使用将会增加。