Department of Plant Sciences, University of California, USA.
CEBAS, CSIC, Murcia, Spain.
J Exp Bot. 2017 Dec 16;68(21-22):5813-5828. doi: 10.1093/jxb/erx391.
We investigated sugar metabolism in leaves and fruits of two Japanese plum (Prunus salicina Lindl.) cultivars, the climacteric Santa Rosa and its bud sport mutant the non-climacteric Sweet Miriam, during development on the tree. We previously characterized differences between the two cultivars. Here, we identified key sugar metabolic pathways. Pearson coefficient correlations of metabolomics and transcriptomic data and weighted gene co-expression network analysis (WGCNA) of RNA sequencing (RNA-Seq) data allowed the identification of 11 key sugar metabolism-associated genes: sucrose synthase, sucrose phosphate synthase, cytosolic invertase, vacuolar invertase, invertase inhibitor, α-galactosidase, β-galactosidase, galactokinase, trehalase, galactinol synthase, and raffinose synthase. These pathways were further assessed and validated through the biochemical characterization of the gene products and with metabolite analysis. Our results demonstrated the reprogramming of sugar metabolism in both leaves and fruits in the non-climacteric plum, which displayed a shift towards increased sorbitol synthesis. Climacteric and non-climacteric fruits showed differences in their UDP-galactose metabolism towards the production of galactose and raffinose, respectively. The higher content of galactinol, myo-inositol, raffinose, and trehalose in the non-climacteric fruits could improve the ability of the fruits to cope with the oxidative processes associated with fruit ripening. Overall, our results support a relationship between sugar metabolism, ethylene, and ripening behavior.
我们研究了两个日本李(Prunus salicina Lindl.)品种(即呼吸跃变型 Santa Rosa 和非呼吸跃变型的芽变品种 Sweet Miriam)叶片和果实中的糖代谢在树上发育过程中的变化。我们之前对两个品种之间的差异进行了特征描述。在这里,我们鉴定了关键的糖代谢途径。代谢组学和转录组学数据的 Pearson 系数相关性以及 RNA 测序(RNA-Seq)数据的加权基因共表达网络分析(WGCNA),鉴定出了 11 个与糖代谢相关的关键基因:蔗糖合酶、蔗糖磷酸合酶、细胞质转化酶、液泡转化酶、转化酶抑制剂、α-半乳糖苷酶、β-半乳糖苷酶、半乳糖激酶、海藻糖酶、半乳糖醇合酶和棉子糖合酶。通过对基因产物的生化特性进行进一步评估和验证,并结合代谢物分析,对这些途径进行了研究。我们的结果表明,非呼吸跃变型李在叶片和果实中糖代谢发生了重编程,表现为山梨醇合成增加。呼吸跃变型和非呼吸跃变型果实的 UDP-半乳糖代谢存在差异,分别导致半乳糖和棉子糖的产生。非呼吸跃变型果实中较高的半乳糖醇、肌醇、棉子糖和海藻糖含量可以提高果实应对与果实成熟相关的氧化过程的能力。总的来说,我们的结果支持糖代谢、乙烯和成熟行为之间的关系。