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用曲克芦丁治疗的小鼠基因表达的转录组分析。

Transcriptomic analysis of gene expression in mice treated with troxerutin.

作者信息

Wang Yuerong, Wei Shuangshuang, Chen Lintao, Pei Jinli, Wu Hao, Pei Yechun, Chen Yibo, Wang Dayong

机构信息

Hainan Key Laboratories of Sustainable Utilization of Tropical Bioresources, Hainan University, Haikou, Hainan, China.

Laboratory of Biotechnology and Molecular Pharmacology, Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, Hainan, China.

出版信息

PLoS One. 2017 Nov 30;12(11):e0188261. doi: 10.1371/journal.pone.0188261. eCollection 2017.

Abstract

Troxerutin, a semi-synthetic derivative of the natural bioflavanoid rutin, has been reported to possess many beneficial effects in human bodies, such as vasoprotection, immune support, anti-inflammation and anti-aging. However, the effects of troxerutin on genome-wide transcription in blood cells are still unknown. In order to find out effects of troxerutin on gene transcription, a high-throughput RNA sequencing was employed to analysis differential gene expression in blood cells consisting of leucocytes, erythrocytes and platelets isolated from the mice received subcutaneous injection of troxerutin. Transcriptome analysis demonstrated that the expression of only fifteen genes was significantly changed by the treatment with troxerutin, among which 5 genes were up-regulated and 10 genes were down-regulated. Bioinformatic analysis of the fifteen differentially expressed genes was made by utilizing the Gene Ontology (GO), and the differential expression induced by troxerutin was further evaluated by real-time quantitative PCR (Q-PCR).

摘要

曲克芦丁是天然生物类黄酮芦丁的半合成衍生物,据报道它在人体中具有许多有益作用,如血管保护、免疫支持、抗炎和抗衰老。然而,曲克芦丁对血细胞全基因组转录的影响仍然未知。为了探究曲克芦丁对基因转录的影响,采用高通量RNA测序分析从小鼠皮下注射曲克芦丁后分离得到的包括白细胞、红细胞和血小板的血细胞中的差异基因表达。转录组分析表明,仅15个基因的表达因曲克芦丁处理而发生显著变化,其中5个基因上调,10个基因下调。利用基因本体论(GO)对这15个差异表达基因进行了生物信息学分析,并通过实时定量PCR(Q-PCR)进一步评估了曲克芦丁诱导的差异表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7f10/5708793/e583cec5c99f/pone.0188261.g001.jpg

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