Qiao Nenghu, Xi Lijun, Zhang Jingjing, Liu Dejian, Ge Baosheng, Liu Jianguo
State Key Laboratory of Heavy Oil Processing and Centre for Bioengineering and Biotechnology, College of chemical Engineering, China University of Petroleum (East China), Qingdao, 266580, China.
Antonie Van Leeuwenhoek. 2018 Jun;111(6):945-954. doi: 10.1007/s10482-017-0993-5. Epub 2017 Dec 13.
A bacterial strain, K11, capable of degrading phenol derivatives was isolated from activated sludge of a sewage treatment plant in China. This strain, which can degrade more than ten phenol derivatives, was identified as a Gram-stain negative, rod-shaped, asporogenous, facultative anaerobic bacterium with a polar flagellum. The strain was found to grow in tryptic soy broth in the presence of 0-2.5% (w/v) NaCl (optimum 0-1%), at 4-43 °C (optimum 30-35 °C) and pH 4.5-10.5 (optimum 7.5-8). Comparative analysis of nearly full-length 16S rRNA gene sequences showed that this strain belongs to the genus Thauera. The 16S rRNA gene sequence was found to show high similarity (97.5%) to that of Thauera chlorobenzoica 3CB-1, with lesser similarity to other recognised Thauera strains. The G+C content of the DNA of the strain was determined to be 67.8 mol%. The DNA-DNA hybridization value between K11 and Thauera aromatica DSM6984 was 10.4 ± 4.5%. The genomic OrthoANI values of K11 with the other nine type strains of genus Thauera were less than 81.1%. Chemotaxonomic analysis of strain K11 revealed that Q-8 is the predominant quinone; the polar lipids contain phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, two unidentified phospholipids and five uncharacterised lipids; the major cellular fatty acid was identified as summed feature 3 (C ω7c and/or iso-C 2-OH; 45.9%), followed by C (20.5%) and C ω7c (15.8%). Based on the phenotypic and phylogenetic evidence, DNA-DNA hybridisation, OrthoANI, chemotaxonomic analysis and results of the physiological and biochemical tests, a new species named Thauera sinica sp. nov. is proposed with strain K11 (= CGMCC 1.15731 = KACC 19216) designated as the type strain.
从中国一家污水处理厂的活性污泥中分离出一株能够降解酚类衍生物的细菌菌株K11。该菌株能够降解十多种酚类衍生物,被鉴定为革兰氏阴性、杆状、无芽孢、兼性厌氧且具极生鞭毛的细菌。研究发现该菌株能在胰蛋白胨大豆肉汤中,于0 - 2.5%(w/v)NaCl(最适0 - 1%)存在的情况下,在4 - 43℃(最适30 - 35℃)以及pH 4.5 - 10.5(最适7.5 - 8)的条件下生长。对近乎全长的16S rRNA基因序列进行比较分析表明,该菌株属于陶厄氏菌属。发现其16S rRNA基因序列与氯苯陶厄氏菌3CB - 1的序列具有高度相似性(97.5%),与其他已确认的陶厄氏菌菌株的相似性较低。该菌株DNA的G + C含量测定为67.8 mol%。菌株K11与芳香陶厄氏菌DSM6984之间的DNA - DNA杂交值为10.4 ± 4.5%。K11与陶厄氏菌属其他九个模式菌株的基因组OrthoANI值均小于81.1%。对菌株K11的化学分类分析表明,Q - 8是主要醌类;极性脂质包含磷脂酰甘油、二磷脂酰甘油、磷脂酰乙醇胺、两种未鉴定的磷脂和五种未表征的脂质;主要细胞脂肪酸被鉴定为总和特征3(C ω7c和/或异-C 2-OH;45.9%),其次是C(20.5%)和C ω7c(15.8%)。基于表型和系统发育证据、DNA - DNA杂交、OrthoANI、化学分类分析以及生理生化测试结果,提出一个名为中华陶厄氏菌(Thauera sinica sp. nov.)的新物种,菌株K11(= CGMCC 1.15731 = KACC 19216)被指定为模式菌株。