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长期暴露于香烟烟雾和咀嚼烟草会改变食管上皮细胞中微小RNA的表达。

Chronic Exposure to Cigarette Smoke and Chewing Tobacco Alters Expression of microRNAs in Esophageal Epithelial Cells.

作者信息

Khan Aafaque Ahmad, Advani Jayshree, Patel Krishna, Nanjappa Vishalakshi, Datta Keshava K, Solanki Hitendra Singh, Kumar Prashant, Mathur Premendu Prakash, Nair Bipin, Keshava Prasad Thottethodi Subrahmanya, Chatterjee Aditi, Gowda Harsha

机构信息

Institute of Bioinformatics, International Technology Park, Bangalore 560066, India.

School of Biotechnology, KIIT University, Bhubaneswar 751024, India.

出版信息

Microrna. 2018;7(1):28-37. doi: 10.2174/2211536607666171213123907.

Abstract

BACKGROUND

Esophageal squamous cell carcinoma (ESCC) is one of the most common cancers with high mortality rate. Cigarette smoke and chewing tobacco are well known risk factors associated with ESCC. However, molecular mechanisms associated with development of ESCC among smokers and chewers are poorly understood. MicroRNAs play an important role in regulating physiological and disease processes including esophageal cancer.

OBJECTIVE AND METHODS

In this study, we developed an in vitro model by treating non-neoplastic Het- 1A esophageal cell line with cigarette smoke and chewing tobacco. We carried out miRNA sequencing on Illumina HiSeq 2500 platform and compared miRNA expression pattern across cigarette smoke and chewing tobacco treated Het-1A cells with untreated cells.

RESULTS

We identified and quantified 433 miRNAs in both smoke exposed and chewing tobacco treated cells, of which 13 miRNAs showed significantly altered expression in cigarette smoke exposed cells while 25 miRNAs showed significantly altered expression in chewing tobacco treated cells. In addition, we predicted novel miRNAs from these data-sets. We evaluated miRNAs that showed selective or context dependent expression pattern in cigarette smoke exposed or chewing tobacco treated cells.

CONCLUSION

In this study, we have comprehensively mapped miRNA expression pattern in response to cigarette smoke and chewing tobacco in Het-1A cells. We identified miRNAs that show altered expression in these cell models.

摘要

背景

食管鳞状细胞癌(ESCC)是最常见且死亡率高的癌症之一。香烟烟雾和咀嚼烟草是与ESCC相关的众所周知的风险因素。然而,吸烟者和咀嚼烟草者中与ESCC发生相关的分子机制尚不清楚。微小RNA在调节包括食管癌在内的生理和疾病过程中起重要作用。

目的和方法

在本研究中,我们通过用香烟烟雾和咀嚼烟草处理非肿瘤性Het-1A食管细胞系建立了体外模型。我们在Illumina HiSeq 2500平台上进行了微小RNA测序,并将香烟烟雾和咀嚼烟草处理的Het-1A细胞与未处理细胞的微小RNA表达模式进行了比较。

结果

我们在暴露于烟雾和咀嚼烟草处理的细胞中鉴定并定量了433种微小RNA,其中13种微小RNA在暴露于香烟烟雾的细胞中表达显著改变,而25种微小RNA在咀嚼烟草处理的细胞中表达显著改变。此外,我们从这些数据集中预测了新的微小RNA。我们评估了在暴露于香烟烟雾或咀嚼烟草处理的细胞中显示出选择性或上下文依赖性表达模式的微小RNA。

结论

在本研究中,我们全面绘制了Het-1A细胞中对香烟烟雾和咀嚼烟草反应的微小RNA表达模式。我们鉴定出在这些细胞模型中表达改变的微小RNA。

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