Gomide Anne Cybelle Pinto, de Sá Pablo Gomes, Cavalcante Ana Lidia Queiroz, de Jesus Sousa Thiago, Gomes Lucas Gabriel Rodrigues, Ramos Rommel Thiago Juca, Azevedo Vasco, Silva Artur, Folador Adriana Ribeiro Carneiro
Department of General Biology, Institute of Biological Sciences, Federal University of Minas Gerais, Av. Antônio Carlos, Belo Horizonte 31.270-901, Brazil.
Laboratory of DNA Polymorphism, Institute of Biological Sciences, Federal University of Pará, Rua Augusto Corrêa, Belém 66.075-110, Brazil.
Gene. 2018 Mar 1;645:124-130. doi: 10.1016/j.gene.2017.12.015. Epub 2017 Dec 13.
Transcriptome studies on Corynebacterium pseudotuberculosis have recently contributed to the understanding about this microorganism's survival mechanisms in various hostile conditions. The gene expression profile of the C. pseudotuberculosis strain 1002 (Ovis biovar), has revealed genes that are possible candidates responsible for its maintenance in adverse environments, such as those found in the host. In another strain of this bacterium, 258 (Equi biovar), a high temperature condition was simulated, in order to verify which genes are responsible for promoting the persistence of the bacterium in these conditions, since it tolerates temperatures higher than 40°C, despite being a mesophilic bacterium. It was possible to generate a list of genes using RNAseq technology that possibly contribute to the survival of the bacteria in this hostile environment. A total of 562 genes were considered as differentially expressed, then, after the fold-change cutoff, 113 were considered induced and 114 repressed, resulting in a total of 227 genes. Therefore, hypothetical proteins presented a fold change above 6, and genes characteristically in control for this type of stress, such as hspR, grpE, and dnaK, presented a fold change above 3. The clpB gene, a chaperone, drew attention due to presenting a fold change above 3 and located in a pathogenicity island. These genes may contribute towards efficient solutions to the effects caused by ulcerative lymphangitis in equines, thus attenuating the damage it causes to agribusiness.
近期,对伪结核棒状杆菌的转录组研究有助于人们了解这种微生物在各种恶劣条件下的生存机制。伪结核棒状杆菌1002菌株(绵羊生物变种)的基因表达谱揭示了一些基因,这些基因可能是其在不利环境(如宿主环境)中得以维持生存的候选基因。在该细菌的另一菌株258(马生物变种)中,模拟了高温条件,以验证哪些基因负责促进该细菌在这些条件下的存活,因为尽管它是嗜温菌,但能耐受高于40°C的温度。利用RNAseq技术有可能生成一份基因列表,这些基因可能有助于细菌在这种恶劣环境中存活。共有562个基因被认为是差异表达的,经过倍数变化阈值筛选后,113个基因被认为是诱导表达的,114个基因是抑制表达的,总共227个基因。因此,假设蛋白的倍数变化高于6,而典型的应对这种应激的调控基因,如hspR、grpE和dnaK,其倍数变化高于3。伴侣蛋白clpB基因因倍数变化高于3且位于一个致病岛而受到关注。这些基因可能有助于找到有效解决马溃疡性淋巴管炎所造成影响的办法,从而减轻其对农业综合企业造成的损害。