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环状RNA在小鼠大脑中的区域特异性表达。

Region-specific expression of circular RNAs in the mouse brain.

作者信息

Chen Bei Jun, Yang Belinda, Janitz Michael

机构信息

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia; Paul-Flechsig-Institute for Brain Research, University of Leipzig, Leipzig, Germany.

出版信息

Neurosci Lett. 2018 Feb 14;666:44-47. doi: 10.1016/j.neulet.2017.12.022. Epub 2017 Dec 15.

Abstract

Circular RNAs (circRNAs) are abundant in mammalian brain and their expression is regulated in a tissue- and developmental stage-specific manner. Mammalian brain is the most transcriptionally complex organ. While many studies have extensively studied linear transcriptome and its biological functions in the brain, the circular transcriptome remains largely unexplored. This study focused on investigation of circRNA expression patterns in the mammalian brain regions critical for cognitive and memory functions and performed comparative analysis with the linear transcriptome. Altogether our study showed that circular and linear RNAs have independent expression patterns despite being derived from the same genomic locus, and that circular transcriptomes from different brain region have distinct characteristics in terms of transcript abundance and composition.

摘要

环状RNA(circRNAs)在哺乳动物大脑中大量存在,其表达以组织和发育阶段特异性的方式受到调控。哺乳动物大脑是转录最复杂的器官。虽然许多研究广泛研究了大脑中的线性转录组及其生物学功能,但环状转录组在很大程度上仍未被探索。本研究聚焦于对哺乳动物大脑中对认知和记忆功能至关重要的区域的circRNA表达模式进行研究,并与线性转录组进行比较分析。我们的研究总体表明,环状RNA和线性RNA尽管来自相同的基因组位点,但具有独立的表达模式,并且不同脑区的环状转录组在转录本丰度和组成方面具有不同的特征。

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