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使用无标记定量蛋白质组学对不同感染状态儿童的血浆蛋白进行表征。

Characterization of plasma proteins in children of different infection status using label-free quantitative proteomics.

作者信息

Li Jieqiong, Sun Lin, Xu Fang, Xiao Jing, Jiao Weiwei, Qi Hui, Shen Chen, Shen Adong

机构信息

Beijing Key Laboratory of Pediatric Respiratory Infection Diseases, Beijing Pediatric Research Institute, Beijing Children's Hospital, Capital Medical University, National Center for Children's Health, Beijing, China.

National Clinical Research Center for Respiratory Diseases, Beijing, China.

出版信息

Oncotarget. 2017 Sep 23;8(61):103290-103301. doi: 10.18632/oncotarget.21179. eCollection 2017 Nov 28.

Abstract

Tuberculosis (TB), caused by (MTB), is an infectious disease found worldwide. Children infected with MTB are more likely to progress to active TB (ATB); however, the molecular mechanism behind this process has long been a mystery. We employed the label-free quantitative proteomic technology to identify and characterize differences in plasma proteins between ATB and latent TB infection (LTBI) in children. To detect differences that are indicative of MTB infection, we first selected proteins whose expressions were markedly different between the ATB and LTBI groups and the control groups (inflammatory disease control (IDC) and healthy control (HC) groups). A total of 521 proteins differed (> 1.5-fold or < 0.6-fold) in the LTBI group, and 318 proteins in the ATB group when compared with the control groups. Of these, 49 overlapping proteins were differentially expressed between LTBI and ATB. Gene Ontology (GO) analysis revealed most proteins had a cellular and organelle distribution. The MTB infection status was mainly related to differences in binding, cellular and metabolic processes. XRCC4, PCF11, SEMA4A and ATP11A were selected and further verified by qPCR and western blot. At the mRNA level, the expression of XRCC4, PCF11and SEMA4A presented an increased trend in ATB group compare with LTBI. At the protein level, the expression of all these proteins by western blot in ATB/LTBI was consistent with the trends from proteomic detection. Our results provide important data for future mechanism studies and biomarker selection for MTB infection in children.

摘要

由结核分枝杆菌(MTB)引起的结核病(TB)是一种在全球范围内发现的传染病。感染MTB的儿童更有可能发展为活动性结核病(ATB);然而,这一过程背后的分子机制长期以来一直是个谜。我们采用无标记定量蛋白质组学技术来鉴定和表征儿童ATB与潜伏性结核感染(LTBI)之间血浆蛋白的差异。为了检测表明MTB感染的差异,我们首先选择了在ATB组、LTBI组与对照组(炎症性疾病对照组(IDC)和健康对照组(HC))之间表达明显不同的蛋白质。与对照组相比,LTBI组共有521种蛋白质存在差异(>1.5倍或<0.6倍),ATB组有318种蛋白质存在差异。其中,49种重叠蛋白质在LTBI和ATB之间差异表达。基因本体论(GO)分析显示,大多数蛋白质具有细胞和细胞器分布。MTB感染状态主要与结合、细胞和代谢过程的差异有关。选择XRCC4、PCF11、SEMA4A和ATP11A并通过qPCR和蛋白质印迹进一步验证。在mRNA水平上,与LTBI相比,ATB组中XRCC4、PCF11和SEMA4A的表达呈上升趋势。在蛋白质水平上,通过蛋白质印迹法检测,ATB/LTBI中所有这些蛋白质的表达与蛋白质组学检测结果一致。我们的结果为未来儿童MTB感染的机制研究和生物标志物选择提供了重要数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4394/5732728/60fe0c55dc42/oncotarget-08-103290-g001.jpg

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