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阿根廷地表水中的肠病毒:分子和活病毒检测。

Enteric Viruses in Surface Waters from Argentina: Molecular and Viable-Virus Detection.

机构信息

Instituto de Virología Dr. J. M. Vanella, Facultad de Ciencias Médicas, Universidad Nacional de Córdoba, Córdoba, Argentina

Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Buenos Aires, Argentina.

出版信息

Appl Environ Microbiol. 2018 Feb 14;84(5). doi: 10.1128/AEM.02327-17. Print 2018 Mar 1.

Abstract

Water resources contaminated with wastewater are an important source for the dissemination of enteric viruses with an impact on the health of the population. The aim of the study was to assess the viral contamination of freshwater from a dam in Argentina by using infectious enterovirus detection, viral RNA amplification, and a genetic characterization of five enteric viruses associated with diarrhea and hepatitis. Enterovirus infectivity (iEV) was evaluated by cell culture and direct immunofluorescence. The detection of the viral genome of rotavirus (RV), human astrovirus (HAstV), norovirus (NoV), hepatitis A virus (HAV), and hepatitis E virus (HEV) was performed by reverse transcriptase PCR (RT-PCR). A total of 48 water samples from 4 monitoring points on the body of the dam from January to December 2012 and 66 water samples from 3 tourist beaches on the edge of the dam from October 2013 to October 2015 were collected monthly. During the first period, the overall viral frequency detection was 52.1% for group A RV, 50% for HAstV, 60.4% for NoV, 22.9% for HAV, 2.1% for HEV, and 64.6% for iEV. The overall frequency detection for the second sampling was 18.2% for RV and HAstV, 31.8% for NoV, 7.57% for HEV, and 66.7% for iEV. There was no detection of HAV during this period. The genotypes and genogroups detected through the study correlated with the most common genomic variants associated with human gastrointestinal and hepatitis illnesses. The results obtained could alert the health systems and environmental sanitation to make decisions for viral control and prevention in our environment. The study shows the impact of anthropic contamination of one of the most important tourist water resources in Argentina. This course of recreational water would be a favorable scenario for infection, as well as a reservoir for the enteric viruses, creating a risk for the population exposed to these waters. The results obtained could alert the health systems and environmental sanitation to make decisions for the control and prevention of viral diseases in this environment.

摘要

受废水污染的水资源是肠道病毒传播的重要来源,对人群健康有影响。本研究的目的是评估阿根廷一座大坝的淡水的病毒污染情况,使用传染性肠道病毒检测、病毒 RNA 扩增以及与腹泻和肝炎相关的五种肠道病毒的遗传特征进行研究。通过细胞培养和直接免疫荧光法评估肠道病毒感染性(iEV)。通过逆转录 PCR(RT-PCR)检测轮状病毒(RV)、人星状病毒(HAstV)、诺如病毒(NoV)、甲型肝炎病毒(HAV)和戊型肝炎病毒(HEV)的病毒基因组。2012 年 1 月至 12 月,从大坝主体的 4 个监测点采集了 48 个水样,2013 年 10 月至 2015 年 10 月,从大坝边缘的 3 个旅游海滩采集了 66 个水样,每月采集一次。在第一个阶段,A 组 RV 的总体病毒检出率为 52.1%,HAstV 为 50%,NoV 为 60.4%,HAV 为 22.9%,HEV 为 2.1%,iEV 为 64.6%。第二个采样阶段的总体检测频率为 RV 和 HAstV 为 18.2%,NoV 为 31.8%,HEV 为 7.57%,iEV 为 66.7%。该阶段未检测到 HAV。通过研究检测到的基因型和基因群与与人类胃肠道和肝炎疾病相关的最常见基因组变异相关。研究结果可以提醒卫生系统和环境卫生部门就环境中的病毒控制和预防做出决策。该研究显示了人为污染对阿根廷最重要的旅游水资源之一的影响。该娱乐用水可能是感染的有利场景,也是肠道病毒的储存库,为接触这些水的人群带来风险。研究结果可以提醒卫生系统和环境卫生部门就环境中的病毒控制和预防做出决策。

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