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深度学习揭示轻度认知障碍患者阿尔茨海默病的发病:一项国际挑战赛的结果。

Deep learning reveals Alzheimer's disease onset in MCI subjects: Results from an international challenge.

机构信息

Dipartimento Interateneo di Fisica "M. Merlin", Università degli studi di Bari "A. Moro", Bari, Italy; Istituto Nazionale di Fisica Nucleare, Sezione di Bari, Bari, Italy.

Istituto Nazionale di Fisica Nucleare, Sezione di Bari, Bari, Italy.

出版信息

J Neurosci Methods. 2018 May 15;302:3-9. doi: 10.1016/j.jneumeth.2017.12.011. Epub 2017 Dec 26.

Abstract

BACKGROUND

Early diagnosis of Alzheimer's disease (AD) and its onset in subjects affected by mild cognitive impairment (MCI) based on structural MRI features is one of the most important open issues in neuroimaging. Accordingly, a scientific challenge has been promoted, on the international Kaggle platform, to assess the performance of different classification methods for prediction of MCI and its conversion to AD.

NEW METHOD

This work presents a classification strategy based on Random Forest feature selection and Deep Neural Network classification using a mixed cohort including the four classes of classification problem, that is HC, AD, MCI and cMCI, to train the model. Moreover, we compare this approach with a novel classification strategy based on fuzzy logic learned on a mixed cohort including only HC and AD.

EXPERIMENTS

A training set of 240 subjects and a test set including mixed cohort of 500 real and simulated subjects were used. The data included AD patients, MCI subjects converting to AD (cMCI), MCI subjects and healthy controls (HC). This work ranked third for overall accuracy (38.8%) over 19 participating teams.

COMPARISON WITH EXISTING METHOD(S): The "International challenge for automated prediction of MCI from MRI data" hosted by the Kaggle platform has been promoted to validate different methodologies with a common set of data and evaluation procedures.

CONCLUSION

DNNs reach a classification accuracy significantly higher than other machine learning strategies; on the other hand, fuzzy logic is particularly accurate with cMCI, suggesting a combination of these approaches could lead to interesting future perspectives.

摘要

背景

基于结构磁共振成像(MRI)特征对阿尔茨海默病(AD)进行早期诊断和对轻度认知障碍(MCI)患者进行发病预测是神经影像学领域的一个重要未决问题。因此,在国际 Kaggle 平台上提出了一项科学挑战,旨在评估不同分类方法在预测 MCI 及其向 AD 转化方面的性能。

方法

本研究提出了一种基于随机森林特征选择和深度神经网络分类的分类策略,使用包括 HC、AD、MCI 和 cMCI 四类分类问题的混合队列对模型进行训练。此外,我们还比较了这种方法与一种基于混合队列(仅包括 HC 和 AD)的模糊逻辑学习的新分类策略。

实验

使用了一个包含 240 名受试者的训练集和一个包含 500 名真实和模拟受试者的测试集。数据包括 AD 患者、向 AD 转化的 MCI 患者(cMCI)、MCI 患者和健康对照者(HC)。在 19 个参赛队伍中,本研究的整体准确率(38.8%)排名第三。

与现有方法的比较

Kaggle 平台主办的“从 MRI 数据自动预测 MCI 的国际挑战赛”旨在使用共同的数据和评估程序验证不同的方法。

结论

DNN 达到了显著高于其他机器学习策略的分类准确率;另一方面,模糊逻辑对于 cMCI 特别准确,这表明这些方法的结合可能会带来有趣的未来前景。

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