• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过将随机表面行走全局优化与神经网络相结合进行材料发现。

Material discovery by combining stochastic surface walking global optimization with a neural network.

作者信息

Huang Si-Da, Shang Cheng, Zhang Xiao-Jie, Liu Zhi-Pan

机构信息

Collaborative Innovation Center of Chemistry for Energy Material , Key Laboratory of Computational Physical Science (Ministry of Education) , Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials , Department of Chemistry , Fudan University , Shanghai 200433 , China . Email:

出版信息

Chem Sci. 2017 Sep 1;8(9):6327-6337. doi: 10.1039/c7sc01459g. Epub 2017 Jun 30.

DOI:10.1039/c7sc01459g
PMID:29308174
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5628601/
Abstract

While the underlying potential energy surface (PES) determines the structure and other properties of a material, it has been frustrating to predict new materials from theory even with the advent of supercomputing facilities. The accuracy of the PES and the efficiency of PES sampling are two major bottlenecks, not least because of the great complexity of the material PES. This work introduces a "Global-to-Global" approach for material discovery by combining for the first time a global optimization method with neural network (NN) techniques. The novel global optimization method, named the stochastic surface walking (SSW) method, is carried out massively in parallel for generating a global training data set, the fitting of which by the atom-centered NN produces a multi-dimensional global PES; the subsequent SSW exploration of large systems with the analytical NN PES can provide key information on the thermodynamics and kinetics stability of unknown phases identified from global PESs. We describe in detail the current implementation of the SSW-NN method with particular focuses on the size of the global data set and the simultaneous energy/force/stress NN training procedure. An important functional material, TiO, is utilized as an example to demonstrate the automated global data set generation, the improved NN training procedure and the application in material discovery. Two new TiO porous crystal structures are identified, which have similar thermodynamics stability to the common TiO rutile phase and the kinetics stability for one of them is further proved from SSW pathway sampling. As a general tool for material simulation, the SSW-NN method provides an efficient and predictive platform for large-scale computational material screening.

摘要

虽然潜在的势能面(PES)决定了材料的结构和其他性质,但即便有了超级计算设备,从理论上预测新材料仍然令人沮丧。PES的准确性和PES采样的效率是两个主要瓶颈,尤其是因为材料PES的复杂性很高。这项工作首次将全局优化方法与神经网络(NN)技术相结合,引入了一种用于材料发现的“全局到全局”方法。这种新颖的全局优化方法称为随机表面行走(SSW)方法,它大规模并行执行以生成全局训练数据集,以原子为中心的NN对其进行拟合可生成多维全局PES;随后使用解析NN PES对大型系统进行SSW探索,可以提供有关从全局PES中识别出的未知相的热力学和动力学稳定性的关键信息。我们详细描述了SSW-NN方法的当前实现方式,特别关注全局数据集的大小以及能量/力/应力NN的同步训练过程。以一种重要的功能材料TiO为例,展示了自动全局数据集生成、改进的NN训练过程以及在材料发现中的应用。确定了两种新的TiO多孔晶体结构,它们与常见的TiO金红石相具有相似的热力学稳定性,并且通过SSW路径采样进一步证明了其中一种的动力学稳定性。作为材料模拟的通用工具,SSW-NN方法为大规模计算材料筛选提供了一个高效且具有预测性的平台。

相似文献

1
Material discovery by combining stochastic surface walking global optimization with a neural network.通过将随机表面行走全局优化与神经网络相结合进行材料发现。
Chem Sci. 2017 Sep 1;8(9):6327-6337. doi: 10.1039/c7sc01459g. Epub 2017 Jun 30.
2
From Atoms to Fullerene: Stochastic Surface Walking Solution for Automated Structure Prediction of Complex Material.从原子到富勒烯:复杂材料自动结构预测的随机表面行走解决方案
J Chem Theory Comput. 2013 Jul 9;9(7):3252-60. doi: 10.1021/ct400238j. Epub 2013 Jun 20.
3
Large-Scale Atomic Simulation via Machine Learning Potentials Constructed by Global Potential Energy Surface Exploration.通过全局势能面探索构建机器学习势的大规模原子模拟。
Acc Chem Res. 2020 Oct 20;53(10):2119-2129. doi: 10.1021/acs.accounts.0c00472. Epub 2020 Sep 17.
4
Stochastic surface walking method for crystal structure and phase transition pathway prediction.用于晶体结构和相变路径预测的随机表面行走方法。
Phys Chem Chem Phys. 2014 Sep 7;16(33):17845-56. doi: 10.1039/c4cp01485e.
5
Ultrasmall Au clusters supported on pristine and defected CeO: Structure and stability.负载在未掺杂和缺陷 CeO2 上的超小 Au 团簇:结构与稳定性。
J Chem Phys. 2019 Nov 7;151(17):174702. doi: 10.1063/1.5126187.
6
Stability and anion diffusion kinetics of Yttria-stabilized zirconia resolved from machine learning global potential energy surface exploration.通过机器学习全局势能面探索解析钇稳定氧化锆的稳定性和阴离子扩散动力学。
J Chem Phys. 2020 Mar 7;152(9):094703. doi: 10.1063/1.5142591.
7
Automated search for optimal surface phases (ASOPs) in grand canonical ensemble powered by machine learning.基于机器学习的巨正则系综中最优表面相的自动搜索 (ASOPs)。
J Chem Phys. 2022 Mar 7;156(9):094104. doi: 10.1063/5.0084545.
8
Fitting potential energy surfaces with fundamental invariant neural network. II. Generating fundamental invariants for molecular systems with up to ten atoms.用基本不变神经网络拟合势能面。II. 为至多十个原子的分子系统生成基本不变量。
J Chem Phys. 2020 May 29;152(20):204307. doi: 10.1063/5.0010104.
9
Theoretical studies on triplet-state driven dissociation of formaldehyde by quasi-classical molecular dynamics simulation on machine-learning potential energy surface.基于机器学习势能面的准经典分子动力学模拟对甲醛三重态驱动解离的理论研究
J Chem Phys. 2021 Dec 7;155(21):214105. doi: 10.1063/5.0067176.
10
Neural-network potential energy surface with small database and high precision: A benchmark of the H + H system.基于小数据库和高精度的神经网络势能面:H + H 体系的基准。
J Chem Phys. 2019 Sep 21;151(11):114302. doi: 10.1063/1.5118692.

引用本文的文献

1
Lattice O-O ligands in Fe-incorporated hydroxides enhance water oxidation electrocatalysis.含铁氢氧化物中的晶格O-O配体增强水氧化电催化作用。
Nat Chem. 2025 Aug 18. doi: 10.1038/s41557-025-01898-6.
2
Machine learning and data-driven methods in computational surface and interface science.计算表面与界面科学中的机器学习和数据驱动方法。
NPJ Comput Mater. 2025;11(1):196. doi: 10.1038/s41524-025-01691-6. Epub 2025 Jul 1.
3
Distinctly different active sites of ZnO-ZrO catalysts in CO and CO hydrogenation to methanol reactions.ZnO-ZrO催化剂在CO及CO加氢制甲醇反应中截然不同的活性位点。

本文引用的文献

1
Three-phase junction for modulating electron-hole migration in anatase-rutile photocatalysts.用于调控锐钛矿-金红石光催化剂中电子-空穴迁移的三相结。
Chem Sci. 2015 Jun 1;6(6):3483-3494. doi: 10.1039/c5sc00621j. Epub 2015 Apr 7.
2
Pressure-induced silica quartz amorphization studied by iterative stochastic surface walking reaction sampling.通过迭代随机表面行走反应采样研究压力诱导的二氧化硅石英非晶化
Phys Chem Chem Phys. 2017 Feb 8;19(6):4725-4733. doi: 10.1039/c6cp06895b.
3
Ensemble-Average Representation of Pt Clusters in Conditions of Catalysis Accessed through GPU Accelerated Deep Neural Network Fitting Global Optimization.
Nat Commun. 2025 May 18;16(1):4622. doi: 10.1038/s41467-025-59996-5.
4
Machine Learning-Driven Insights for Phase-Stable FA Cs Pb(I Br ) Perovskites in Tandem Solar Cells.机器学习驱动的关于串联太阳能电池中相稳定的FA Cs Pb(I Br)钙钛矿的见解。
JACS Au. 2025 Mar 13;5(4):1771-1780. doi: 10.1021/jacsau.5c00033. eCollection 2025 Apr 28.
5
Unraveling the mechanisms of ketene generation and transformation in syngas-to-olefin conversion over ZnCrO |SAPO-34 catalysts.揭示ZnCrO|SAPO-34催化剂上合成气制烯烃过程中乙烯酮生成和转化的机理。
Chem Sci. 2025 Apr 10;16(20):8711-8720. doi: 10.1039/d5sc01651g. eCollection 2025 May 21.
6
Data-driven discovery of Pt single atom embedded germanosilicate MFI zeolite catalysts for propane dehydrogenation.基于数据驱动发现用于丙烷脱氢的铂单原子嵌入锗硅铝酸盐MFI沸石催化剂。
Nat Commun. 2025 Apr 19;16(1):3720. doi: 10.1038/s41467-025-58960-7.
7
Origin of Autocatalytic Behavior of Water over CuZn Alloy in CO Hydrogenation.铜锌合金上一氧化碳加氢反应中水的自催化行为起源
Chem Bio Eng. 2024 Feb 26;1(3):274-282. doi: 10.1021/cbe.3c00124. eCollection 2024 Apr 25.
8
LASP to the Future of Atomic Simulation: Intelligence and Automation.通向原子模拟未来的LASP:智能与自动化。
Precis Chem. 2024 Sep 14;2(12):612-627. doi: 10.1021/prechem.4c00060. eCollection 2024 Dec 23.
9
The Transformation Mechanism of Graphite to Hexagonal Diamond under Shock Conditions.冲击条件下石墨向六方金刚石的转变机制
JACS Au. 2024 Aug 25;4(9):3413-3420. doi: 10.1021/jacsau.4c00523. eCollection 2024 Sep 23.
10
Data-driven discovery of active phosphine ligand space for cross-coupling reactions.用于交叉偶联反应的活性膦配体空间的数据驱动发现。
Chem Sci. 2024 Jul 19;15(33):13359-13368. doi: 10.1039/d4sc02327g. eCollection 2024 Aug 22.
通过GPU加速深度神经网络拟合全局优化获取的催化条件下铂簇的系综平均表示
J Chem Theory Comput. 2016 Dec 13;12(12):6213-6226. doi: 10.1021/acs.jctc.6b00994. Epub 2016 Nov 16.
4
Multiscale Quantum Mechanics/Molecular Mechanics Simulations with Neural Networks.基于神经网络的多尺度量子力学/分子力学模拟
J Chem Theory Comput. 2016 Oct 11;12(10):4934-4946. doi: 10.1021/acs.jctc.6b00663. Epub 2016 Sep 6.
5
Subnano Pt Particles from a First-Principles Stochastic Surface Walking Global Search.基于第一性原理随机表面游走全局搜索的亚纳米铂颗粒
J Chem Theory Comput. 2016 Sep 13;12(9):4698-706. doi: 10.1021/acs.jctc.6b00556. Epub 2016 Aug 16.
6
Constrained Broyden Dimer Method with Bias Potential for Exploring Potential Energy Surface of Multistep Reaction Process.用于探索多步反应过程势能面的带偏置势的约束布罗伊登二聚体方法
J Chem Theory Comput. 2012 Jul 10;8(7):2215-22. doi: 10.1021/ct300250h. Epub 2012 Jun 7.
7
Stochastic Surface Walking Method for Structure Prediction and Pathway Searching.用于结构预测和路径搜索的随机表面行走方法
J Chem Theory Comput. 2013 Mar 12;9(3):1838-45. doi: 10.1021/ct301010b. Epub 2013 Feb 19.
8
From Atoms to Fullerene: Stochastic Surface Walking Solution for Automated Structure Prediction of Complex Material.从原子到富勒烯:复杂材料自动结构预测的随机表面行走解决方案
J Chem Theory Comput. 2013 Jul 9;9(7):3252-60. doi: 10.1021/ct400238j. Epub 2013 Jun 20.
9
High-Dimensional Neural Network Potentials for Organic Reactions and an Improved Training Algorithm.用于有机反应的高维神经网络势及一种改进的训练算法
J Chem Theory Comput. 2015 May 12;11(5):2187-98. doi: 10.1021/acs.jctc.5b00211. Epub 2015 Apr 28.
10
Variable-cell double-ended surface walking method for fast transition state location of solid phase transitions.用于快速确定固相转变过渡态的可变单元双端表面行走方法
J Chem Theory Comput. 2015 Oct 13;11(10):4885-94. doi: 10.1021/acs.jctc.5b00641. Epub 2015 Oct 5.