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姜科阳春砂经 MeJA 诱导的 RNA 测序鉴定参与萜类生物合成的 WRKY 和萜烯合酶基因。

RNA sequencing on Amomum villosum Lour. induced by MeJA identifies the genes of WRKY and terpene synthases involved in terpene biosynthesis.

机构信息

Guangzhou University of Chinese Medicine, Research Center of Chinese Herbal Resource Science and Engineering, Guangzhou, Guangdong, 510006, China; Guangzhou University of Chinese Medicine, Key Laboratory of Chinese Medicinal Resource from Lingnan, Ministry of Education, Guangzhou, Guangdong, 510006, China.

出版信息

Genome. 2018 Feb;61(2):91-102. doi: 10.1139/gen-2017-0142.

Abstract

Amomum villosum Lour. is an important Chinese medicinal plant that has diverse medicinal functions, and mainly contains volatile terpenes. This study aims to explore the WRKY transcription factors (TFs) and terpene synthase (TPS) unigenes that might be involved in terpene biosynthesis in A. villosum, and thus providing some new information on the regulation of terpenes in plants. RNA sequencing of A. villosum induced by methyl jasmonate (MeJA) revealed that the WRKY family was the second largest TF family in the transcriptome. Thirty-six complete WRKY domain sequences were expressed in response to MeJA. Further, six WRKY unigenes were highly correlated with eight deduced TPS unigenes. Ultimately, we combined the terpene abundance with the expression of candidate WRKY TFs and TPS unigenes to presume a possible model wherein AvWRKY61, AvWRKY28, and AvWRKY40 might coordinately trans-activate the AvNeoD promoter. We propose an approach to further investigate TF unigenes that might be involved in terpenoid biosynthesis, and identified four unigenes for further analyses.

摘要

阳春砂(Amomum villosum Lour.)是一种重要的药用植物,具有多种药用功能,主要含有挥发性萜类化合物。本研究旨在探索可能参与阳春砂萜类生物合成的 WRKY 转录因子(TFs)和萜烯合酶(TPS)基因,为植物萜类化合物的调控提供新信息。茉莉酸甲酯(MeJA)诱导的阳春砂 RNA 测序表明,WRKY 家族是转录组中第二大 TF 家族。36 个完整的 WRKY 结构域序列对 MeJA 有响应。此外,6 个 WRKY 基因与 8 个推定的 TPS 基因高度相关。最终,我们将萜类化合物丰度与候选 WRKY TF 和 TPS 基因的表达结合起来,推测出一个可能的模型,即 AvWRKY61、AvWRKY28 和 AvWRKY40 可能协同转录激活 AvNeoD 启动子。我们提出了一种进一步研究可能参与萜类生物合成的 TF 基因的方法,并鉴定了 4 个基因进行进一步分析。

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