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细胞死亡驱动的微生物菌落生长的形态动力学

Morphodynamics of a growing microbial colony driven by cell death.

机构信息

Centre for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500107, India.

Center for Theoretical Biological Physics, Rice University, Texas 77005, USA.

出版信息

Phys Rev E. 2017 Nov;96(5-1):052404. doi: 10.1103/PhysRevE.96.052404. Epub 2017 Nov 8.

DOI:10.1103/PhysRevE.96.052404
PMID:29347664
Abstract

Bacterial cells can often self-organize into multicellular structures with complex spatiotemporal morphology. In this work, we study the spatiotemporal dynamics of a growing microbial colony in the presence of cell death. We present an individual-based model of nonmotile bacterial cells which grow and proliferate by consuming diffusing nutrients on a semisolid two-dimensional surface. The colony spreads by growth forces and sliding motility of cells and undergoes cell death followed by subsequent disintegration of the dead cells in the medium. We model cell death by considering two possible situations: In one of the cases, cell death occurs in response to the limitation of local nutrients, while the other case corresponds to an active death process, known as apoptotic or programmed cell death. We demonstrate how the colony morphology is influenced by the presence of cell death. Our results show that cell death facilitates transitions from roughly circular to highly branched structures at the periphery of an expanding colony. Interestingly, our results also reveal that for the colonies which are growing in higher initial nutrient concentrations, cell death occurs much earlier compared to the colonies which are growing in lower initial nutrient concentrations. This work provides new insights into the branched patterning of growing bacterial colonies as a consequence of complex interplay among the biochemical and mechanical effects.

摘要

细菌细胞通常可以自我组织成具有复杂时空形态的多细胞结构。在这项工作中,我们研究了在细胞死亡存在的情况下,微生物菌落的时空动力学。我们提出了一种基于个体的非运动细菌细胞模型,这些细胞在半固态二维表面上通过消耗扩散的营养物质来生长和增殖。菌落通过生长力和细胞滑动运动进行扩展,并经历细胞死亡,随后在培养基中死亡细胞的随后解体。我们通过考虑两种可能的情况来模拟细胞死亡:在一种情况下,细胞死亡是由于局部营养物质的限制而发生的,而另一种情况则对应于称为凋亡或程序性细胞死亡的主动死亡过程。我们展示了细胞死亡如何影响菌落形态。我们的结果表明,细胞死亡促进了从扩展菌落的外围的大致圆形到高度分支的结构的转变。有趣的是,我们的结果还表明,对于在较高初始营养浓度下生长的菌落,与在较低初始营养浓度下生长的菌落相比,细胞死亡发生得更早。这项工作为由于生化和力学效应之间的复杂相互作用而导致的生长细菌菌落的分支模式提供了新的见解。

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Morphodynamics of a growing microbial colony driven by cell death.细胞死亡驱动的微生物菌落生长的形态动力学
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